Parental gene:

NASP, ENSPPYG00000001409

Aliases:None
Description:nuclear autoantigenic sperm protein (histone-binding) [Source:HGNC Symbol;Acc:7644]
Organism:Orangutan (Pongo abelii)
Coordinates:1:184280847..184316204(-)


>ENSPPYG00000001409
ATGGCCACGGAGTCCACAGCCACTGCCGCCGTCGCCACGGAGCTGGTTTCTGCCGACAAAATTGAAGATGTTCCTGCTCC
TTCTACATCTGCAGATAAAGTAGAGAGTCTGGATGTGGATAGTGAAGCTAAGAAACTATTGGGTTTAGGACAGAAACATC
TGGTGATGGGGGATATTCCAGCAGCTGTCAATGCATTCCAGGAAGCAGCTAGTCTTTTAGGTAAGAAGTATGGAGAGACA
GCTAATGAGTGTGGAGAAGCCTTCTTTTTCTATGGGAAATCACTTCTGGAATTGGCAAGAATGGAGAATGGTGTGTTGGG
AAACGCCTTGGAAGGTGTGCATGTGGAAGAGGAAGAAGGAGAAAAAACAGAAGATGAATCTCTGGTAGAAAATAATGATA
ACATAGATGAGGAAGCAAGGGAAGAGTTGAGAGAACAGGTTTATGACGCCATGGGAGAAAAAGAAGAAGCCAAAAAAACA
GAAGACAAGTCTTTGGCAAAGCCTGAAACTGATAAAGAACAGGACAGTGAAATGGAGAAGGGTGGAAGAGAAGATATGGA
TATAAGTGAATCTGCAGAGGAGCCACAGGAAAAAGTTGACTTGACTCTAGATTGGTTAACTGAAACCTCTGAAGAGGCAA
ACGGAGGAGCAGCACCAGAAGGACCGAATGAAGCTGAGGTCACTTCTGGGAAGCCAGAACAGGAAGTACCAGATGCTGAG
GAAGAAAAATCAGTTTCTGGAACTGATGTCCAAGAAGAGTACAGAGAAAAAGGAGGTCAGGAGAAGCAGGGAGAGGTAAT
TGTGAGCATAGAGAAGCCAAAAGAAGTTTCAGAAGAGCAGCCTGTGGTGACTCTAGAAAAGCAGGGCACTGCAGTAGAGG
TAGAAGCAGAGTCTTTAGACCCGACAGTCAAGCCAGTGGATGTGGGTGGGGACGAGCCAGAGGAGAAGGTAGTTACCTCT
GAAAATGAGGCAGGAAAGGCGGTTCTTGAACAACTGGTAGGTCAAGAAGTGCCACCTGCTGAAGAGTCACCAGAGGTGAC
AACAGAGGCTGCAGAGGCCTCAGCTGTAGAGGCTGGATCAGAAGTCTCTGAAAAGCCTGGGCAGGAGGCTCCAGTTCTCC
CTAAGGATGGTGCAGTCAATGGACCGTCAGTTGTAGGAGATCAGACTCCTATTGAACCACAGACTTCTATAGAAAGACTG
ACAGAAACAAAAGATGGCTCAGGACTAGAGGAGAAGGTCAGGGCAAAGCTGGTTCCTAGTCAGGAGGAGACTAAGCTGTC
TGTAGAAGAGTCTGAGGCAGCTGGAGATGGGGTTGATACCAAGGTAGCCCAGGGAGCTACTGAGAAATCACCTGAAGACA
AAGTTCAGATAGCTGCTAATGAAGAGACACAAGAGAGAGAAGAACAGATGAAAGAGGGTGAAGAAACTGAAGGCTCAGAA
GAGGATGATAAAGAAAATGATAAGACTGAAGAAATGCCAAACGATTCAGTCCTTGAAAACAAGTCTCTTCAAGAAAATGA
AGAGGAGGAGATTGGGAACCTAGAGCTTGCCTGGGATATGCTGGATTTAGCAAAGATCATTTTTAAAAGGCAAGAAACAA
AAGAAGCACAGCTTTATGCTGCCCAGGCACATCTTAAACTCGGAGAAGTTAGTGTTGAATCTGAAAACTATGTGCAAGCT
GTGGAGGAGTTCCAGTCCTGCCTTAACCTGCAGGAACAGTACCTGGAAGCCCACGACCGTCTCCTTGCAGAGACCCACTA
CCAGCTGGGCTTGGCTTATGGGTACAACTCTCAGTATGATGAGGCAGTGGCACAGTTCAGCAAATCTATTGAAGTCATTG
AGAAGAGAATGGCTGTACTAAATGAGCAGGTGAAGGAGGCTGAAGGATCGTCTGCTGAATACAAGAAAGAAATCGAGGAA
CTAAAGGAACTGCTACCCGAAATTAGAGAGAAGATAGAAGATGCAAAGGAGTCTCAGCATAGTGGGAATGTAGCTGAACT
GGCTCTGAAAGCTACTCTGGTGGAGAGCTCTACTTCAGGTTTCACTCCTGGTGGAGGAGGCTCTTCAGTCTCCATGATTG
CCAGTAGAAAGCCAACAGACGGTGCTTCCTCATCAAATTGTGTGACTGATATTTCCCACCTTGTCAGAAAGAAGAGGAAA
CCAGAGGAAGAGAGTCCCCGGAAAGATGATGCAAAGAAAGCCAAACAGGAGCCGGAGGTGAACGGAGGCAGCGGGGATGC
TGTCCCCAGTGGAAATGAAGTTTCGGAAAACATGGAGGAGGAGGCTGAGAATCGGGCTGAAAGCCGGGCGGCAGTGGAGG
GGACAGTGGAGGCTGGAGCTACAGTTGAAAGCACTGCATGTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 28 .42 RPM
SRP007412_cerebellum 63 .60 RPM
SRP007412_heart 16 .38 RPM
SRP007412_kidney 27 .61 RPM
SRP007412_liver 29 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010436 ortholog_one2one 1 retrogene
retro_chof_2560,
Homo sapiens ENSG00000132780 ortholog_one2one 1 retrogene
retro_hsap_4064,
Macropus eugenii ENSMEUG00000001037 ortholog_one2one 1 retrogene
retro_meug_1359,
Mus musculus ENSMUSG00000028693 ortholog_one2one 1 retrogene
retro_mmus_1217,
Nomascus leucogenys ENSNLEG00000014434 ortholog_one2one 1 retrogene
retro_nleu_564,
Pan troglodytes ENSPTRG00000000677 ortholog_one2one 1 retrogene
retro_ptro_2754,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3338 90.35 87.80
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Download FASTA sequences of all ENSPPYG00000001409 retrocopies