Parental gene: | PTCD3, ENSPPYG00000012216 |
| Aliases: | PTCD3, MRP-S39 |
| Description: | pentatricopeptide repeat-containing protein 3, mitochondrial precursor [Source:RefSeq peptide;Acc:NP_001126041] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 2a:23992930..24024236(-) |
>ENSPPYG00000012216
ATGGCGGGTGTATCCGCTGTTCGCTGGTTGGGGCTCCGCAGCAGGCTTGGCCAGCCGCTGACGGGTCGGCGGGCGGGTCT
GTGTAAACAGGCACGCAGCTGCAGATTTTATTCTGGTAGTGCAACCCTCTCAAAGGTTGAAGGAACTGATATAACAGGGA
TTGAAGAAGTAGTAATTCCAAAAAAGAAAACTTGGGATAAAGTAGCCGTTCTTCAGGCACTTGCGTCCACAGTAAACAGG
GATACCACAAGTGTGCCTTATGTGTTTCAAGATGATCCTTACCTTATACCAGCATCCTCTTTGGAATCTCGTTTATTTTT
ACTGGCAAAGAAATCCGGGGAGAATGTGGCCAAGTTTATTATTAATTCATACCCCAAATATTTTCAGAAGGACATAGCTG
AACCTCATATACCGTGTTTAATGCCTGAGTACTTTGAACCTCAGATCAAAGACATAAGTGAAGCCGCCCTGAAGGAACGA
ATCGAGCTCAGAAAAGTCAAAGCCTCTGTGGACATGTTTGATCAGCTTTTGCAAGCAGGAACCACTGTGTCTCTTGAAAC
AACAAATAGTCTTTTGGATTTATTGTGTTACTTTGGTGACCAGGAGCCCTCAACTGATTATCATTTTCAACAAACTGAAC
AGTCAGAAGCATTGGAAGTGGAAAATGATGAGACATCTAGGAGGAAAGCTGGTCATCAGTTTGGAGTTACATGGCAAGCA
AAAAACAACGCTGAGAGAATCTTTTCTCTAATGCCAGAGAAAAATGCACATTCCTATTGCACAATGATCCGAGGAATGGT
GAAGCACCGAGCTTATGAGCAGGCGTTAAACTTGTACACTGAGTTACTAAACAACAGACTCCATGCTGATGTATACACGT
TTAATGCACTGACTGAAGCAACAGTATGCGTGATAAATGAGAAATTTGAGGAAAAATGGAGTAAAATACAGGAGCTGCTA
AGACACATGGTTGCTCAGAAGGTGAAACCAAATCTGCAGACTTTTAATACCATTCTGAAATGTCTCCGAAGATTTCATGT
GTTTGCAAGATCTCCGGCCTTACAGATTTTACGTGAAATGAAAGCCATTGGAATAGAACCCTCACTTGCAACATATCACC
ATATTATTCACGTGTTTGATCAACCTGGAGACCCTTTAAAGAGATCATCCTTCATCATTTATGATATAATGAATGAATTA
ATGGGAAAGAGATTTTCTCCAAAGGACCCAGATGATGATAAGTTTTTTCAGTCAGCCATGAGCATATGCTCATCTCTCAG
AGATCTAGAACTTGCCTACCAAGTACATGGCCTTTTAAATACCGGAGACAACTGGAAATTCATTGGACCTGATCATCATC
GTAATTTCTATTATTCCAAGTTCTTCGATTTGATTTGTCTAATGGAACAAATTGATGTTACCTTGAAGTGGTATGAGGAC
CTGATACCTTCAGTCTACTTTCCCCACTCCCAAACATTGATACATCTTCTCCAAGCATTGGATGTGGCCAATCGGCTAGA
AATGATTCCTAAAATTTGGAAAGATAGTAAAGAATATGGTCATACTTTCCGCAGCGACCTGAGAGAAGAGATCCTGAAGC
TCATGGCAAGGGACAAGCACCCACCAGAGCTTCAGGTGGCATTTGCTGACTGTGCTGCTGATATCAAATCTGCGTATGAA
AGCCAACACATCAGACAGACTGCTCAGGATTGGCCAGCCACCTCTCTCAACTGTATAGCTATCCTCTTTTTAAGGGCTGG
GAGAACTCAGGAAGCCTGGAACATGTTGGAGCTTTTCAGGAAGCATAATAAGATTCCTAGAAGTGAGTTGCTGAATGAGC
TTATGGACAGTGCAAAAGTGTCTAACAGCCCTTCCCAGGCCATTGAAGTAGTAGAGCTGGCAAGTGCCTTCAGCTTACCT
ATTTGTGAGGGCCTCACCCAGAGAGTAATGAGTGATTTTGCAATCAACCAGGAACAAAAGGAAGCCCTAGGTAATCTAAC
TGCATTGACCAGTGACAGTGATACTGACAGCAGCAGTGACAGTGACAGTGACACCAGTGAAGGCAAATGA
ATGGCGGGTGTATCCGCTGTTCGCTGGTTGGGGCTCCGCAGCAGGCTTGGCCAGCCGCTGACGGGTCGGCGGGCGGGTCT
GTGTAAACAGGCACGCAGCTGCAGATTTTATTCTGGTAGTGCAACCCTCTCAAAGGTTGAAGGAACTGATATAACAGGGA
TTGAAGAAGTAGTAATTCCAAAAAAGAAAACTTGGGATAAAGTAGCCGTTCTTCAGGCACTTGCGTCCACAGTAAACAGG
GATACCACAAGTGTGCCTTATGTGTTTCAAGATGATCCTTACCTTATACCAGCATCCTCTTTGGAATCTCGTTTATTTTT
ACTGGCAAAGAAATCCGGGGAGAATGTGGCCAAGTTTATTATTAATTCATACCCCAAATATTTTCAGAAGGACATAGCTG
AACCTCATATACCGTGTTTAATGCCTGAGTACTTTGAACCTCAGATCAAAGACATAAGTGAAGCCGCCCTGAAGGAACGA
ATCGAGCTCAGAAAAGTCAAAGCCTCTGTGGACATGTTTGATCAGCTTTTGCAAGCAGGAACCACTGTGTCTCTTGAAAC
AACAAATAGTCTTTTGGATTTATTGTGTTACTTTGGTGACCAGGAGCCCTCAACTGATTATCATTTTCAACAAACTGAAC
AGTCAGAAGCATTGGAAGTGGAAAATGATGAGACATCTAGGAGGAAAGCTGGTCATCAGTTTGGAGTTACATGGCAAGCA
AAAAACAACGCTGAGAGAATCTTTTCTCTAATGCCAGAGAAAAATGCACATTCCTATTGCACAATGATCCGAGGAATGGT
GAAGCACCGAGCTTATGAGCAGGCGTTAAACTTGTACACTGAGTTACTAAACAACAGACTCCATGCTGATGTATACACGT
TTAATGCACTGACTGAAGCAACAGTATGCGTGATAAATGAGAAATTTGAGGAAAAATGGAGTAAAATACAGGAGCTGCTA
AGACACATGGTTGCTCAGAAGGTGAAACCAAATCTGCAGACTTTTAATACCATTCTGAAATGTCTCCGAAGATTTCATGT
GTTTGCAAGATCTCCGGCCTTACAGATTTTACGTGAAATGAAAGCCATTGGAATAGAACCCTCACTTGCAACATATCACC
ATATTATTCACGTGTTTGATCAACCTGGAGACCCTTTAAAGAGATCATCCTTCATCATTTATGATATAATGAATGAATTA
ATGGGAAAGAGATTTTCTCCAAAGGACCCAGATGATGATAAGTTTTTTCAGTCAGCCATGAGCATATGCTCATCTCTCAG
AGATCTAGAACTTGCCTACCAAGTACATGGCCTTTTAAATACCGGAGACAACTGGAAATTCATTGGACCTGATCATCATC
GTAATTTCTATTATTCCAAGTTCTTCGATTTGATTTGTCTAATGGAACAAATTGATGTTACCTTGAAGTGGTATGAGGAC
CTGATACCTTCAGTCTACTTTCCCCACTCCCAAACATTGATACATCTTCTCCAAGCATTGGATGTGGCCAATCGGCTAGA
AATGATTCCTAAAATTTGGAAAGATAGTAAAGAATATGGTCATACTTTCCGCAGCGACCTGAGAGAAGAGATCCTGAAGC
TCATGGCAAGGGACAAGCACCCACCAGAGCTTCAGGTGGCATTTGCTGACTGTGCTGCTGATATCAAATCTGCGTATGAA
AGCCAACACATCAGACAGACTGCTCAGGATTGGCCAGCCACCTCTCTCAACTGTATAGCTATCCTCTTTTTAAGGGCTGG
GAGAACTCAGGAAGCCTGGAACATGTTGGAGCTTTTCAGGAAGCATAATAAGATTCCTAGAAGTGAGTTGCTGAATGAGC
TTATGGACAGTGCAAAAGTGTCTAACAGCCCTTCCCAGGCCATTGAAGTAGTAGAGCTGGCAAGTGCCTTCAGCTTACCT
ATTTGTGAGGGCCTCACCCAGAGAGTAATGAGTGATTTTGCAATCAACCAGGAACAAAAGGAAGCCCTAGGTAATCTAAC
TGCATTGACCAGTGACAGTGATACTGACAGCAGCAGTGACAGTGACAGTGACACCAGTGAAGGCAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 54 .85 RPM |
| SRP007412_cerebellum | 132 .42 RPM |
| SRP007412_heart | 65 .75 RPM |
| SRP007412_kidney | 82 .44 RPM |
| SRP007412_liver | 80 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000132300 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001793 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002493 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1653 | 82.88 | 63.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000012216 retrocopies