Parental gene: | PARL, ENSPPYG00000014338 |
| Aliases: | PARL, PSARL |
| Description: | Presenilins-associated rhomboid-like protein, mitochondrial P-beta [Source:UniProtKB/Swiss-Prot;Acc:Q5R5H4] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:187661280..187731886(-) |
>ENSPPYG00000014338
ATGGCGTGGCGAGGCTGGGCGCAGAGAGGCTGGGGCTGCGGCCAGGCGTGGGCTGCGTCGGTGGGCGGCCGCAGCTGCGA
GGAGCTCACTGCGGCCCTAACCCCGCCGCGGCTCCTCGGACGCAGGTTTAACTTCTTTATTCAACAAAAATGCGGATTCA
GAAAAGCACCCAGGAAGGTTGAACCTCGAAGATCAGACACAGGGACAAGTGGTGAAGCATACAAGAGAAGTGCTTTGATT
CCTCCTGTGGAAGAAACAGTTTTTTATCCTTCTCCCTATCCTATAAGGAGTCTCATAAAACCTTTATTTTTTACTGTTGG
GTTTACAGGCTGTGCATTTGGATCAGCTGCTATTTGGCAATATGAATCACTGAAATCCAGGGTCCAGAGTTATTTTGATG
GTATAAAAGCTGATTGGTTGGATAGCATAAGACCACAAAAAGAAGGAGACTTCAGAAAGGAGATTAACAAGTGGTGGAAT
AACCTAAGTGATGGCCAGCGGACTGTGACAGGTATTATAGCTGCAAATGTCCTTGTATTCTGTTTATGGAGAGTACCTTC
TCTGCAGCGGACAATGATCAGATATTTCACATCGAATCCAGCCTCAAAGGTCCTTTGTTCTCCAATGTTGCTGTCAACAT
TCAGTCATTTCTCCTTATTTCACATGGCAGCAAATATGTATGTTTTGTGGAGCTTCTCTTCCAGCATAGTGAACATTCTG
GGTCAAGAGCAGTTCATGGCAGTGTACCTATCTGCAGGTGTTATTTCCAATTTTGTCAGTTACGTGGGTAAAGTTGCCAC
AGGAAGATATGGACCATCACTTGGTGCATCTGGCGCCATCATGACAGTCCTCGCAGCTGTCTGCACTAAGATCCCAGAAG
GGAGGCTTGCCATTATTTTCCTTCCGATGTTCACGTTCACAGCAGGGAATGCCCTGAAAGCCATTATCGCCATGGATACA
GCAGGAATGATCCTGGGATGGAAATTCTTTGATCATGCGGCACATCTTGGGGGAGCTCTTTTTGGAATACAGGAATTCCA
GGCTTGGACTGGAGTGAAGCCCTCAAGATCCACAAAGACAAAATCAGCCCGAGTCATCACAACCCACACTTCGGGATGGG
ACAGCAGCCCTGGGGCCGGCTTCCAGGTCCCAGAGGTGAGGAAGAAGTTCACTCCTAACCCCTCTGCCATCTTTCAGGCC
TCAGCTCCCCGGATTCTCAACGTGTGA
ATGGCGTGGCGAGGCTGGGCGCAGAGAGGCTGGGGCTGCGGCCAGGCGTGGGCTGCGTCGGTGGGCGGCCGCAGCTGCGA
GGAGCTCACTGCGGCCCTAACCCCGCCGCGGCTCCTCGGACGCAGGTTTAACTTCTTTATTCAACAAAAATGCGGATTCA
GAAAAGCACCCAGGAAGGTTGAACCTCGAAGATCAGACACAGGGACAAGTGGTGAAGCATACAAGAGAAGTGCTTTGATT
CCTCCTGTGGAAGAAACAGTTTTTTATCCTTCTCCCTATCCTATAAGGAGTCTCATAAAACCTTTATTTTTTACTGTTGG
GTTTACAGGCTGTGCATTTGGATCAGCTGCTATTTGGCAATATGAATCACTGAAATCCAGGGTCCAGAGTTATTTTGATG
GTATAAAAGCTGATTGGTTGGATAGCATAAGACCACAAAAAGAAGGAGACTTCAGAAAGGAGATTAACAAGTGGTGGAAT
AACCTAAGTGATGGCCAGCGGACTGTGACAGGTATTATAGCTGCAAATGTCCTTGTATTCTGTTTATGGAGAGTACCTTC
TCTGCAGCGGACAATGATCAGATATTTCACATCGAATCCAGCCTCAAAGGTCCTTTGTTCTCCAATGTTGCTGTCAACAT
TCAGTCATTTCTCCTTATTTCACATGGCAGCAAATATGTATGTTTTGTGGAGCTTCTCTTCCAGCATAGTGAACATTCTG
GGTCAAGAGCAGTTCATGGCAGTGTACCTATCTGCAGGTGTTATTTCCAATTTTGTCAGTTACGTGGGTAAAGTTGCCAC
AGGAAGATATGGACCATCACTTGGTGCATCTGGCGCCATCATGACAGTCCTCGCAGCTGTCTGCACTAAGATCCCAGAAG
GGAGGCTTGCCATTATTTTCCTTCCGATGTTCACGTTCACAGCAGGGAATGCCCTGAAAGCCATTATCGCCATGGATACA
GCAGGAATGATCCTGGGATGGAAATTCTTTGATCATGCGGCACATCTTGGGGGAGCTCTTTTTGGAATACAGGAATTCCA
GGCTTGGACTGGAGTGAAGCCCTCAAGATCCACAAAGACAAAATCAGCCCGAGTCATCACAACCCACACTTCGGGATGGG
ACAGCAGCCCTGGGGCCGGCTTCCAGGTCCCAGAGGTGAGGAAGAAGTTCACTCCTAACCCCTCTGCCATCTTTCAGGCC
TCAGCTCCCCGGATTCTCAACGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 36 .55 RPM |
| SRP007412_cerebellum | 61 .04 RPM |
| SRP007412_heart | 16 .41 RPM |
| SRP007412_kidney | 28 .17 RPM |
| SRP007412_liver | 25 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000014935 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000004507 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000033918 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000007882 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000023222 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2290 | 79.35 | 59.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2912 | 85.85 | 55.41 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000014338 retrocopies