Parental gene:

AIMP1, ENSPPYG00000014981

Aliases:AIMP1, SCYE1
Description:aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Source:RefSeq peptide;Acc:NP_001126507]
Organism:Orangutan (Pongo abelii)
Coordinates:4:111005954..111038008(+)


>ENSPPYG00000014981
ATGATTTTCTGCCGTCTGTTGGCAAAAATGGCAAATAATGATGCTGTTCTGAAGAGACTGGAGCAGAAGGGTGCAGAGGC
AGATCAAATCATTGAATATCTTAAGCAGCAAGTTTCTCTACTTAAGGAGAAAGCAATTTTGCAGGCAACTTTGAGGGAAG
AGAAGAAACTTCGAGTTGAAAATGCTAAACTGAAGAAAGAAATTGAAGAACTGAAACAAGAGCTAATTCAGGCAGAAATT
CAAAATGGAGTGAAGCAAATACCATTTCCGTCTGGTACTCCACTGCAAACTAAGTCTATGGTTTCTGAAAATATGGTACA
GTCTACACCAGTAACAACCGTATCTTCTGGTACCAAAGAACAGATAAAAGGAGGAACAGGAGACGAAAAGAAAGCGAAAG
AGAAAATTGAAAAAAAAGGAGAGAAGAAGGAGAAAAAACAGCAATCAATAGCTGGAAGTGCCGACTCTAAGCCAATAGAT
GTTTCCCGTCTGGATCTTCGAATTGGTTGCATCATAACTGCTAGAAAACACCCTGATGCAGATTCTTTGTATGTAGAAGA
AGTAGATGTTGGAGAAATAGCCCCAAGGACAGTTGTCAGTGGCCTGGTGAATCATGTTCCTCTTGAACAGATGCAAAATC
GGATGGTGATTTTACTTTGTAACCTGAAACCTGCAAAGATGAGGGGAGTATTATCTCAAGCAATGGTCATGTGTGCTAGT
TCACCAGAGAAAATTGAAATCTTGGCTCCTCCAAATGGGTCTGTTCCTGGAGACAGAATTACTTTTGATGCTTTCCCAGG
AGAGCCCGACAAGGAGCTGAATCCTAAGAAGAGATTTGGGAGCAGATCCAGCCTGATCTTCACACTAACGATGAGTGTGT
GGCTACATACAAAGGAGTTCCCTTTGAGGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 20 .62 RPM
SRP007412_cerebellum 22 .74 RPM
SRP007412_heart 23 .27 RPM
SRP007412_kidney 20 .58 RPM
SRP007412_liver 18 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000619 ortholog_one2one 2 retrogenes
retro_chof_1176, retro_chof_2050,
Callithrix jacchus ENSCJAG00000015885 ortholog_one2one 1 retrogene
retro_cjac_2504,
Dipodomys ordii ENSDORG00000005018 ortholog_one2one 1 retrogene
retro_dord_540,
Mustela putorius furo ENSMPUG00000008952 ortholog_one2one 1 retrogene
retro_mputfur_1606,
Mus musculus ENSMUSG00000028029 ortholog_one2one 2 retrogenes
retro_mmus_2271, retro_mmus_3334,
Rattus norvegicus ENSRNOG00000011384 ortholog_one2many 1 retrogene
retro_rnor_1704,
Ictidomys tridecemlineatus ENSSTOG00000008178 ortholog_one2one 1 retrogene
retro_itri_1173,
Tupaia belangeri ENSTBEG00000004412 ortholog_one2one 1 retrogene
retro_tbel_4008,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1780 72.96 52.48
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000014981 retrocopies