Parental gene:

CBLL1, ENSPPYG00000017904

Aliases:None
Description:Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:21225]
Organism:Orangutan (Pongo abelii)
Coordinates:7:103922398..103937654(+)


>ENSPPYG00000017904
ATGGATCACACTGACAATGAGTTACAAGGCACTAATAGTTCTGGATCCCTGGGTGGTCTTGATGTTCGCAGACGAATTCC
TATAAAGCTCATCTCCAAACAAGCAAACAAAGCGAAACCTGCACCGCGAACTCAAAGAACTATAAACAGGATGCCTGCAA
AGGCTCCACCTGGTGATGAAGAAGGATTTGATTATAATGAAGAAGAACGGTATGACTGTAAAGGGGGTGAGCTGTTTGGA
AATCAGCGAAGATTTCCTGGACACCTTTTTTGGGACTTTCAGATAAACATCTTAGGTGAAAAGGATGATACACCAGTTCA
TTTCTGTGACAAGTGTGGATTGCCTATTAAAATCTATGGGAGAATGATTCCATGCAAGCATGTTTTTTGCTATGACTGTG
CTATTTTACATGAAAAAAAGGGAGACAAGATGTGTCCAGGCTGTAGTGATCCTGTGCAGCGAATTGAGCAGTGTACACGA
GGTTCTCTCTTCATGTGTAGCATTGTTCAAGGGTGCAAGAGAACATATTTGTCTCAGAGAGACTTACAGGCTCATATCAA
CCATCGCCATATGAGAGCTGGAAAACCTGTTACCCGTGCTTCACTTGAAAATGTTCATCCTCCTATTGCCCCACCACCAA
CTGAAATCCCTGAACGTTTTATAATGCCACCAGACAAGCACCATATGAGCCATATTCCGCCAAAGCAGCACATCATGATG
CCACCACCTCCTTTGCAACATGTGCCACATGAGCACTATAATCAGCCACATGAGGATATTCGTGCTCCTCCAGCAGAATT
GTCCATGGCTCCACCTCCACCTCGATCGGTCAGTCAGGAAACCTTTCGTATTTCAACAAGAAAACACAGCAATTTAATAA
CCGTCCCTATTCAGGATGACTCAAATTCAGGTGCTAGAGAACCACCACCTCCTGCCCCAGCACCTGCTCACCATCATCCT
GAATATCAGGGTCAACCAGTGGTATCGCACCCTCATCATATTATGCCTCCACAGCAACATTATGCACCACCCCCACCTCC
TCCACCACCAATAAGCCATCCAATGCCACATCCTCCCCAGGCTGCAGGTACTCCTCACTTGGTATATAGCCAAGCTCCAC
CTCCACCAATGACCTCTGCTCCACCACCAATAACCCCGCCGCCTGGACATATTATTGCCCAGATGCCACCTTATATGAAT
CATCCT

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .16 RPM
SRP007412_cerebellum 10 .46 RPM
SRP007412_heart 3 .70 RPM
SRP007412_kidney 4 .21 RPM
SRP007412_liver 3 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016379 ortholog_one2one 1 retrogene
retro_cjac_4046,
Homo sapiens ENSG00000105879 ortholog_one2one 1 retrogene
retro_hsap_49,
Gorilla gorilla ENSGGOG00000004921 ortholog_one2one 1 retrogene
retro_ggor_164,
Microcebus murinus ENSMICG00000012936 ortholog_one2one 1 retrogene
retro_mmur_1635,
Nomascus leucogenys ENSNLEG00000008660 ortholog_one2one 1 retrogene
retro_nleu_19,
Pan troglodytes ENSPTRG00000019583 ortholog_one2one 1 retrogene
retro_ptro_67,
Rattus norvegicus ENSRNOG00000007253 ortholog_one2one 1 retrogene
retro_rnor_1063,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_112 52.01 73.63
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Download FASTA sequences of all ENSPPYG00000017904 retrocopies