Parental gene: | CCNY, ENSPTRG00000002421 |
| Aliases: | None |
| Description: | Cyclin Y [Source:UniProtKB/TrEMBL;Acc:K7BZJ5] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 10:35964639..36059340(+) |
>ENSPTRG00000002421
TTGAACATGGAATTCAATCCTTCAGATCATCCTCGGGCCAGCACAATATTCCTCAGTAAATCTCAGACAGACGTGAGAGA
AAAACGCAAGAGTCTCTTCATTAACCATCATCCTCCAGGACAAATAGCAAGGAAATACAGTTCCTGCTCCACCATTTTCC
TAGATGATAGCACAGTCAGTCAACCAAACCTCAAGTATACAATTAAATGTGTCGCTCTTGCAATATATTATCACATCAAA
AACAGGGACCCAGATGGAAGGATGCTCTTAGATATTTTTGATGAAAATCTTCACCCTCTTTCGAAATCCGAAGTGCCACC
AGATTATGACAAACACAACCCAGAGCAGAAGCAGATTTACCGGTTTGTTCGGACACTGTTCAGTGCTGCTCAGCTGACGG
CTGAATGTGCCATCGTCACCCTGGTGTACCTTGAAAGACTTTTAACATACGCAGAGATAGATATCTGTCCGGCCAACTGG
AAGCGGATTGTTTTAGGGGCGATCCTGCTGGCCTCCAAGGTGTGGGATGACCAGGCTGTATGGAATGTGGATTACTGCCA
GATCCTGAAAGACATCACGGTGGAGGACATGAACGAGCTAGAGCGACAGTTTCTTGAATTGCTGCAGTTCAACATCAATG
TTCCTTCCAGTGTCTATGCCAAGTATTATTTTGATCTTCGTTCTCTGGCAGAAGCGAACAACCTGAGCTTTCCCTTGGAG
CCCCTGAGCAGGGAGAGGGCTCACAAGCTTGAGGCCATCTCTCGCCTCTGCGAGGACAAGTACAAGGACCTAAGAAGATC
CGCGAGGAAGCGCTCAGCCAGTGCAGACAACCTGACTCTGCCCCGGTGGTCCCCAGCCATCATCTCTTAA
TTGAACATGGAATTCAATCCTTCAGATCATCCTCGGGCCAGCACAATATTCCTCAGTAAATCTCAGACAGACGTGAGAGA
AAAACGCAAGAGTCTCTTCATTAACCATCATCCTCCAGGACAAATAGCAAGGAAATACAGTTCCTGCTCCACCATTTTCC
TAGATGATAGCACAGTCAGTCAACCAAACCTCAAGTATACAATTAAATGTGTCGCTCTTGCAATATATTATCACATCAAA
AACAGGGACCCAGATGGAAGGATGCTCTTAGATATTTTTGATGAAAATCTTCACCCTCTTTCGAAATCCGAAGTGCCACC
AGATTATGACAAACACAACCCAGAGCAGAAGCAGATTTACCGGTTTGTTCGGACACTGTTCAGTGCTGCTCAGCTGACGG
CTGAATGTGCCATCGTCACCCTGGTGTACCTTGAAAGACTTTTAACATACGCAGAGATAGATATCTGTCCGGCCAACTGG
AAGCGGATTGTTTTAGGGGCGATCCTGCTGGCCTCCAAGGTGTGGGATGACCAGGCTGTATGGAATGTGGATTACTGCCA
GATCCTGAAAGACATCACGGTGGAGGACATGAACGAGCTAGAGCGACAGTTTCTTGAATTGCTGCAGTTCAACATCAATG
TTCCTTCCAGTGTCTATGCCAAGTATTATTTTGATCTTCGTTCTCTGGCAGAAGCGAACAACCTGAGCTTTCCCTTGGAG
CCCCTGAGCAGGGAGAGGGCTCACAAGCTTGAGGCCATCTCTCGCCTCTGCGAGGACAAGTACAAGGACCTAAGAAGATC
CGCGAGGAAGCGCTCAGCCAGTGCAGACAACCTGACTCTGCCCCGGTGGTCCCCAGCCATCATCTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 28 .08 RPM |
| SRP007412_cerebellum | 19 .97 RPM |
| SRP007412_heart | 25 .85 RPM |
| SRP007412_kidney | 26 .10 RPM |
| SRP007412_liver | 19 .48 RPM |
| SRP007412_testis | 194 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000006201 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000005121 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012820 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008072 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1322 | 74.46 | 96.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_3228 | 74.23 | 89.97 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000002421 retrocopies