Parental gene: | VENTX, ENSPTRG00000003087 |
| Aliases: | None |
| Description: | VENT homeobox [Source:HGNC Symbol;Acc:13639] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 10:133051939..133054788(+) |
>ENSPTRG00000003087
ATGCGCCTCTCCTCCTCCCCACCTCGTGGCCGGCAGCAGCTCTCCAGCTTTGGCTCCGTGGACTGGCTCTCCCAGAGCAG
CTGCTCAGGGCCAACCCACACCCCCAGGCCTGCCGACTTCTCCCTGGGGAGCCTCCCTGGCCCGGGCCAGACATCCGGCG
CCCGGGAGCCCCCTCAGGCCGTCAGCATCAAGGAGGCCGCCAGGTCCTCAAATCTGCCTGCGCCGGAGAGGACCGTGGCC
GGGTTGAGTAAGGAGCCAAATACCTTGCGGGTCCCCCGTGTCCGCACAGCCTTCACCATGGAGCAGGTCCGCACCTTGGA
GGGCGTCTTCCAGCACCACCAGTACCTGAGCCCTCTGGAGCGGAAGAGGCTGGCCAGGGAGATGCAGCTCTCAGAGGTCC
AGATAAAAACCTGGTTTCAGAATCGCCGGATGAAACACAAACGGCAAATGCAGGACCCCCAGCTGCACAGCCCCTTCTCG
GGGTCTCTCCCCGCGCCCCCAGCTTTCTACTCACCGTCTTCTGGCCTTGCCAATGGCCTGCAGCTGCTGTGCCCTTGGGC
ACCCCTGTCCGGGCCTCAGGCTCTGATGCTGCCGCCTGGCTCCTTCTGGGGTCTCTGCCAAGTGGCACAAGAGGCCCTGG
CATCTGTGGGAGCTTCCTGCTGCGGGCAGCCTCTGGCGTCCCACCCCCCTACCCCAGGCCGGCCTACGCTGGGACCAGCC
CTGTCCACGGGGCCCCGGGGCCTGTGTGCTATGCCACAGACAGGGGATGCATTTTGA
ATGCGCCTCTCCTCCTCCCCACCTCGTGGCCGGCAGCAGCTCTCCAGCTTTGGCTCCGTGGACTGGCTCTCCCAGAGCAG
CTGCTCAGGGCCAACCCACACCCCCAGGCCTGCCGACTTCTCCCTGGGGAGCCTCCCTGGCCCGGGCCAGACATCCGGCG
CCCGGGAGCCCCCTCAGGCCGTCAGCATCAAGGAGGCCGCCAGGTCCTCAAATCTGCCTGCGCCGGAGAGGACCGTGGCC
GGGTTGAGTAAGGAGCCAAATACCTTGCGGGTCCCCCGTGTCCGCACAGCCTTCACCATGGAGCAGGTCCGCACCTTGGA
GGGCGTCTTCCAGCACCACCAGTACCTGAGCCCTCTGGAGCGGAAGAGGCTGGCCAGGGAGATGCAGCTCTCAGAGGTCC
AGATAAAAACCTGGTTTCAGAATCGCCGGATGAAACACAAACGGCAAATGCAGGACCCCCAGCTGCACAGCCCCTTCTCG
GGGTCTCTCCCCGCGCCCCCAGCTTTCTACTCACCGTCTTCTGGCCTTGCCAATGGCCTGCAGCTGCTGTGCCCTTGGGC
ACCCCTGTCCGGGCCTCAGGCTCTGATGCTGCCGCCTGGCTCCTTCTGGGGTCTCTGCCAAGTGGCACAAGAGGCCCTGG
CATCTGTGGGAGCTTCCTGCTGCGGGCAGCCTCTGGCGTCCCACCCCCCTACCCCAGGCCGGCCTACGCTGGGACCAGCC
CTGTCCACGGGGCCCCGGGGCCTGTGTGCTATGCCACAGACAGGGGATGCATTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .03 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000151650 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000003340 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000000543 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002047 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_702 | 74.71 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1761 | 79.62 | 60.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2698 | 78.08 | 98.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_2736 | 77.86 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000003087 retrocopies