Parental gene: | NUFIP1, ENSPTRG00000005838 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | GL392075.1:6018922..6069022(-) |
>ENSPTRG00000005838
ATGGCTGAGCCGACTAGTGATTTCGCGACTCCTATCGGGTGGCGTGCGTCTCCCGAGCTGACTCCCACGTTAGGGCCCCT
GAGCGACACTGCCCCGCCGCGGGACAGCTGGATGTTCTGGGCAATGCTGCCGCCACCGCCACCACCGCTTACGTCCTCGC
TTCCCGCAGCCGGGTCAAAGCCTTCCTCTGAGTCGCAGCCCCCCATGGAGGCCCAGTCTCTCCCCGGGGCTCCGCCCCCC
TTCGACGCCCAGATTCTTCCCGGGGCGCAACCCCCCTTCGACGCCCAGTCTCCCCTTGATTCTCAGCCTCAACCCAGCGG
CCAGCCTTGGAATTTCCATGCTTCCACATCGTGGTATTGGAGACAGTCTTCTGATAGGTTTCCTCGGCATCAGAAGTCCT
TCAACCCTGCAGTTAAAAATTCTTATTATCCACGAAAGTATGATGCAAAATTCACAGACTTCAGCTTACCTCCCAGTAGA
AAACAGAAAAAAAAGAAAAGAAAGGAACCAGTTTTTCACTTTTTTTGTGATACCTGTGATCGTGGTTTTAAAAATCAAGA
AAAGTATGACAAACACATGTCTGAACATACAAAATGCCCTGAAGTAGATTGCTCTTTTACTGCACACGAGAAGATTGTCC
AGTTCCATTGGAGAAATATGCATGCTCCTGGCATGAAGAAGATCAAGTTAGACACTCCAGAGGAAATTGCACGGTGGAGG
GAAGAAAGAAGGAAAAACTATCCAACTCTGGCCAATATTGAAAGGAAGAAGAAGTTAAAACTTGAAAAGGAGAAGAGAGG
AGCAGTATTGACAACAACACAATATGGCAAGATGAAGGGGATGTCCAGACATTCACAAATGGCAAAGATCAGAAGTCCTG
GCAAGAATCACAAATGGAAAAACGACAATTCTAGACAGAGAGCAGTCACTGGATCAGGCAATCACTTGTGTGATTTGAAG
CTAGAAGGTCCACCGGAGGCAAATGCAGATCCTCTTGGTGTTTTGATAAACAGTGATTCTGAGTCTGATAAGGAGGAGAA
ACCACAACATTCTGTGATACCCAAGGAAGTGACACCAGCCCTGTGCTCACTAATGAGTAGCTATGGCAGTCTTTCAGGGT
CAGAGAGTGAGCCAGAAGAAACTCCCATCAAGACTGAAGCAGACGTTTTGGCAGAAAACCAGGTTCTTGATAGCAATGCT
CCTAAGAGTCCAAGTCAAGATGTTAAAGCAACTGTTAGAAATTTTTCAGAAGCCAAGAGTGAGAACCGAAAGAAAAGTTT
TGAAAAGACAAACCCTAAGAGGAAAAAAGATTATCACAACTATCAAACGTTATTCGAACCAAGAACACACCATCCATATC
TCTTGGAAATGCTTCTAGCTCCGGACATTCGACATGAAAGAAATGTGATTTTGCAGTGTGTTCGGTACATCATCAAAAAA
GACTTTTTCGGACTGGATACTAATTCTGCGAAAAGTAAAGATGTATAG
ATGGCTGAGCCGACTAGTGATTTCGCGACTCCTATCGGGTGGCGTGCGTCTCCCGAGCTGACTCCCACGTTAGGGCCCCT
GAGCGACACTGCCCCGCCGCGGGACAGCTGGATGTTCTGGGCAATGCTGCCGCCACCGCCACCACCGCTTACGTCCTCGC
TTCCCGCAGCCGGGTCAAAGCCTTCCTCTGAGTCGCAGCCCCCCATGGAGGCCCAGTCTCTCCCCGGGGCTCCGCCCCCC
TTCGACGCCCAGATTCTTCCCGGGGCGCAACCCCCCTTCGACGCCCAGTCTCCCCTTGATTCTCAGCCTCAACCCAGCGG
CCAGCCTTGGAATTTCCATGCTTCCACATCGTGGTATTGGAGACAGTCTTCTGATAGGTTTCCTCGGCATCAGAAGTCCT
TCAACCCTGCAGTTAAAAATTCTTATTATCCACGAAAGTATGATGCAAAATTCACAGACTTCAGCTTACCTCCCAGTAGA
AAACAGAAAAAAAAGAAAAGAAAGGAACCAGTTTTTCACTTTTTTTGTGATACCTGTGATCGTGGTTTTAAAAATCAAGA
AAAGTATGACAAACACATGTCTGAACATACAAAATGCCCTGAAGTAGATTGCTCTTTTACTGCACACGAGAAGATTGTCC
AGTTCCATTGGAGAAATATGCATGCTCCTGGCATGAAGAAGATCAAGTTAGACACTCCAGAGGAAATTGCACGGTGGAGG
GAAGAAAGAAGGAAAAACTATCCAACTCTGGCCAATATTGAAAGGAAGAAGAAGTTAAAACTTGAAAAGGAGAAGAGAGG
AGCAGTATTGACAACAACACAATATGGCAAGATGAAGGGGATGTCCAGACATTCACAAATGGCAAAGATCAGAAGTCCTG
GCAAGAATCACAAATGGAAAAACGACAATTCTAGACAGAGAGCAGTCACTGGATCAGGCAATCACTTGTGTGATTTGAAG
CTAGAAGGTCCACCGGAGGCAAATGCAGATCCTCTTGGTGTTTTGATAAACAGTGATTCTGAGTCTGATAAGGAGGAGAA
ACCACAACATTCTGTGATACCCAAGGAAGTGACACCAGCCCTGTGCTCACTAATGAGTAGCTATGGCAGTCTTTCAGGGT
CAGAGAGTGAGCCAGAAGAAACTCCCATCAAGACTGAAGCAGACGTTTTGGCAGAAAACCAGGTTCTTGATAGCAATGCT
CCTAAGAGTCCAAGTCAAGATGTTAAAGCAACTGTTAGAAATTTTTCAGAAGCCAAGAGTGAGAACCGAAAGAAAAGTTT
TGAAAAGACAAACCCTAAGAGGAAAAAAGATTATCACAACTATCAAACGTTATTCGAACCAAGAACACACCATCCATATC
TCTTGGAAATGCTTCTAGCTCCGGACATTCGACATGAAAGAAATGTGATTTTGCAGTGTGTTCGGTACATCATCAAAAAA
GACTTTTTCGGACTGGATACTAATTCTGCGAAAAGTAAAGATGTATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .20 RPM |
| SRP007412_cerebellum | 4 .02 RPM |
| SRP007412_heart | 2 .22 RPM |
| SRP007412_kidney | 4 .71 RPM |
| SRP007412_liver | 4 .16 RPM |
| SRP007412_testis | 15 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000083635 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000356 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2439 | 91.13 | 65.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2989 | 92.02 | 65.66 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000005838 retrocopies