Parental gene: | SLC35E1, ENSPTRG00000010648 |
| Aliases: | None |
| Description: | Solute carrier family 35, member E1 [Source:UniProtKB/TrEMBL;Acc:K7B5M5] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:16829167..16848777(-) |
>ENSPTRG00000010648
GGCAACGTGGTCAACAAGGTGATCCTGAGCGCCTTCCCGTTCCCGGTGACCGTGTCGCTGTGCCACATCCTGGCTCTGTG
CGCTGGGCTCCCGCCGCTGCTGCGCGCCTGGCGCGTGCCCCCCGCGCCGCCCGTCTCGGGCCCCGGACCCAGTCCGCATC
CGTCGTCCGGCCCGCTGCTGCCGCCGCGCTTCTACCCGCGCTACGTGCTGCCGCTCGCCTTCGGCAAGTACTTCGCGTCA
GTGTCAGCGCACGTCAGCATCTGGAAGGTGCCCGTGTCCTATGCACACACCGTCAAGGCCACCATGCCCATCTGGGTGGT
CCTCCTGTCCCGGATCATTATGAAGGAGAAGCAGAGCACCAAGGTATACTTGTCACTCATCCCCATCATCAGCGGTGTCC
TGCTGGCCACCGTCACCGAGTTGTCTTTTGACATGTGGGGACTCGTCAGCGCCCTCGCCGCCACGCTGTGCTTCTCGCTT
CAGAACATTTTCTCCAAAAAGGTCTTGCGAGATTCACGGATCCACCATCTCCGGCTGCTCAACATCCTGGGCTGCCACGC
CGTCTTCTTTATGATCCCCACCTGGGTTCTGGTGGACCTCTCGGCTTTCCTGGTCAGCAGCGACTTGACCTACGTCTACC
AGTGGCCCTGGACGCTCCTGCTCCTGGCTGTCAGCGGCTTCTGTAACTTTGCCCAGAATGTTATCGCCTTCAGCATCCTC
AACCTCGTTAGCCCCCTGAGCTACTCGGTCGCCAATGCCACCAAAAGAATCATGGTCATCACGGTGTCCCTGATCATGCT
GCGCAACCCAGTCACCAGCACCAACGTCCTGGGCATGATGACCGCCATCCTGGGGGTCTTCCTCTATAACAAGACCAAGT
ACGATGCAAACCAGCAAGCCAGGAAGCACCTCCTCCCCGTCACCACAGCAGACCTGAGCAGCAAGGAGCGTCACCGGAGC
CCACTGGAGAAGCCCCACAACGGCCTCCTCTTCCCCCAGCACGGGGACTATCAGTACGGCCGCAACAACATCTTAACAGA
CCACTTCCAATACAGCCGGCAGAGCTACCCAAACTCGTACAGTTTGAACCGCTATGATGTG
GGCAACGTGGTCAACAAGGTGATCCTGAGCGCCTTCCCGTTCCCGGTGACCGTGTCGCTGTGCCACATCCTGGCTCTGTG
CGCTGGGCTCCCGCCGCTGCTGCGCGCCTGGCGCGTGCCCCCCGCGCCGCCCGTCTCGGGCCCCGGACCCAGTCCGCATC
CGTCGTCCGGCCCGCTGCTGCCGCCGCGCTTCTACCCGCGCTACGTGCTGCCGCTCGCCTTCGGCAAGTACTTCGCGTCA
GTGTCAGCGCACGTCAGCATCTGGAAGGTGCCCGTGTCCTATGCACACACCGTCAAGGCCACCATGCCCATCTGGGTGGT
CCTCCTGTCCCGGATCATTATGAAGGAGAAGCAGAGCACCAAGGTATACTTGTCACTCATCCCCATCATCAGCGGTGTCC
TGCTGGCCACCGTCACCGAGTTGTCTTTTGACATGTGGGGACTCGTCAGCGCCCTCGCCGCCACGCTGTGCTTCTCGCTT
CAGAACATTTTCTCCAAAAAGGTCTTGCGAGATTCACGGATCCACCATCTCCGGCTGCTCAACATCCTGGGCTGCCACGC
CGTCTTCTTTATGATCCCCACCTGGGTTCTGGTGGACCTCTCGGCTTTCCTGGTCAGCAGCGACTTGACCTACGTCTACC
AGTGGCCCTGGACGCTCCTGCTCCTGGCTGTCAGCGGCTTCTGTAACTTTGCCCAGAATGTTATCGCCTTCAGCATCCTC
AACCTCGTTAGCCCCCTGAGCTACTCGGTCGCCAATGCCACCAAAAGAATCATGGTCATCACGGTGTCCCTGATCATGCT
GCGCAACCCAGTCACCAGCACCAACGTCCTGGGCATGATGACCGCCATCCTGGGGGTCTTCCTCTATAACAAGACCAAGT
ACGATGCAAACCAGCAAGCCAGGAAGCACCTCCTCCCCGTCACCACAGCAGACCTGAGCAGCAAGGAGCGTCACCGGAGC
CCACTGGAGAAGCCCCACAACGGCCTCCTCTTCCCCCAGCACGGGGACTATCAGTACGGCCGCAACAACATCTTAACAGA
CCACTTCCAATACAGCCGGCAGAGCTACCCAAACTCGTACAGTTTGAACCGCTATGATGTG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 7 .94 RPM |
| SRP007412_cerebellum | 12 .37 RPM |
| SRP007412_heart | 4 .52 RPM |
| SRP007412_kidney | 9 .36 RPM |
| SRP007412_liver | 5 .56 RPM |
| SRP007412_testis | 1 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000127526 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005563 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000009692 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_804 | 87.68 | 56.40 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000010648 retrocopies