Parental gene: | PDCL2, ENSPTRG00000016073 |
| Aliases: | None |
| Description: | phosducin-like 2 [Source:HGNC Symbol;Acc:29524] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 4:74415312..74453774(+) |
>ENSPTRG00000016073
ATGCAGGATCCCAATGAAGATACAGAATGGAATGACATTTTAAGAGATTTCGGCATTCTTCCTCCTAAAGAAGAGTCAAA
AGATGAAATTGAAGAAATGGTTTTACGTTTACAGAAAGAAGCAATGGTGAAACCATTTGAAAAGATGACTCTTGCACAGC
TAAAGGAAGCTGAAGATGAATTTGATGAAGAAGATATGCAGGCTATTGAAACATATAGAAAGAAGCGGTTACAGGAATGG
AAAGCTCTTAAGAAAAAACAAAAATTTGGAGAATTAAGAGAAATTTCTGGAAATCAATATGTGAATGAAGTCACAAATGC
AGAAGAAGATGTGTGGGTTATAACTCATCTATACAGATCAAGCATCCCAATGTGTTTGTTGGTTAACCAGCATCTTAGTC
TTCTAGCAAGAAAGTTTCCAGAAACTAAATTTGTTAAAGCCATCGTGAATAGCTGTATTCAACACTACCATGACAATTGT
TTACCAACAATTTTTGTTTATAAAAATGGTCAGATAGAAGCCAAATTCATTGGAATTATAGAATGTGGAGGGATAAATCT
CAAGCTGGAAGAACTTGAATGGAAGCTAGCAGAAGTTGGAGCAATACAGACTGATTTGGAAGAAAACCCCAGAAAAGACA
TTGTAGATATGATGGTATCTTCAATTAGAAACACTTCTATTCATGATGACAGTGATAGCTCCAACAGTGATAATGATACC
AAATAG
ATGCAGGATCCCAATGAAGATACAGAATGGAATGACATTTTAAGAGATTTCGGCATTCTTCCTCCTAAAGAAGAGTCAAA
AGATGAAATTGAAGAAATGGTTTTACGTTTACAGAAAGAAGCAATGGTGAAACCATTTGAAAAGATGACTCTTGCACAGC
TAAAGGAAGCTGAAGATGAATTTGATGAAGAAGATATGCAGGCTATTGAAACATATAGAAAGAAGCGGTTACAGGAATGG
AAAGCTCTTAAGAAAAAACAAAAATTTGGAGAATTAAGAGAAATTTCTGGAAATCAATATGTGAATGAAGTCACAAATGC
AGAAGAAGATGTGTGGGTTATAACTCATCTATACAGATCAAGCATCCCAATGTGTTTGTTGGTTAACCAGCATCTTAGTC
TTCTAGCAAGAAAGTTTCCAGAAACTAAATTTGTTAAAGCCATCGTGAATAGCTGTATTCAACACTACCATGACAATTGT
TTACCAACAATTTTTGTTTATAAAAATGGTCAGATAGAAGCCAAATTCATTGGAATTATAGAATGTGGAGGGATAAATCT
CAAGCTGGAAGAACTTGAATGGAAGCTAGCAGAAGTTGGAGCAATACAGACTGATTTGGAAGAAAACCCCAGAAAAGACA
TTGTAGATATGATGGTATCTTCAATTAGAAACACTTCTATTCATGATGACAGTGATAGCTCCAACAGTGATAATGATACC
AAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .06 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 45 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012692 | ortholog_one2one | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000000666 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007908 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000020680 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_148 | 52.77 | 96.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_675 | 53.81 | 80.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1810 | 57.98 | 96.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_1865 | 53.71 | 93.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_2402 | 56.43 | 98.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_2690 | 50.39 | 51.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ptro_2784 | 54.24 | 96.68 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000016073 retrocopies