Parental gene:

C8H8orf46, ENSPTRG00000020307

Aliases:None
Description:Pan troglodytes chromosome 8 open reading frame 46 ortholog (C8H8orf46), mRNA. [Source:RefSeq mRNA;Acc:NM_001251906]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:8:64329303..64357681(+)


>ENSPTRG00000020307
ATGATGCATCAGATTTACAGCTGCAGTGACGAGAACATAGAAGTTTTCACCACCGTGATTCCTTCCAAGGTATCCAGTCC
AGCCAGAAGAAGAGCCAAAAGCTCTCAGCACCTCTTGACCAAGAATGTGGTGATCGAGTCGGACCTGTACACGCACCAGC
CCCTGGAGCTGCTGCCCCACCGCGGAGACCGCAGGGACCCTGGCGACCGCCGCAGGTTTGGGCGGCTCCAGACCGCGCGG
CCGCCCACAGCCCACCCGGCCAAAGCCTCTGCCAGACCCGTGGGGATTTCTGAACCCAAAACATCAAATCTGTGTGGGAA
TCGAGCATATGGAAAATCTCTGATACCGCCAGTGCCCCGGATCTCAGTGAAAACTTCGGCCTCTGCCTCATTGGAGGCGA
CAGCCATGGGCACAGAGAAGGGAGCTGTTCTGATGAGAGGATCCAGACATCTCAAGAAGATGACTGAAGAGTATCCAGCC
CTTCCCCAAGGAGCGGAAGCCTCTCTACCACTGACGGGCAGTGCTTCCTGCGGCGTCCCCGGCATCCTCCGGAAAATGTG
GACAAGGCACAAGAAGAAGTCTGAATATGTGGGAGCCACCAACAGCGCCTTTGAGGCCGACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 123 .07 RPM
SRP007412_cerebellum 7 .35 RPM
SRP007412_heart 0 .26 RPM
SRP007412_kidney 1 .41 RPM
SRP007412_liver 0 .10 RPM
SRP007412_testis 0 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000169085 ortholog_one2one 1 retrogene
retro_hsap_3937,
Gorilla gorilla ENSGGOG00000008516 ortholog_one2one 1 retrogene
retro_ggor_2646,
Macaca mulatta ENSMMUG00000022419 ortholog_one2one 1 retrogene
retro_mmul_2280,
Nomascus leucogenys ENSNLEG00000010728 ortholog_one2one 1 retrogene
retro_nleu_634,
Pongo abelii ENSPPYG00000018639 ortholog_one2one 2 retrogenes
retro_pabe_3245, retro_pabe_3378,
Tupaia belangeri ENSTBEG00000014906 ortholog_one2one 1 retrogene
retro_tbel_1795,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2673 68.18 52.66
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Download FASTA sequences of all ENSPTRG00000020307 retrocopies