Parental gene: | NAP1L4, ENSPTRG00000028747 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 11:2974642..3022685(-) |
>ENSPTRG00000028747
ATGGCAGATCACAGTTTTTCAGATGGGGTTCCTTCAGATTCCGTGGAAGCTGCTAAAAATGCAAGTAACACAGAAAAGCT
CACAGATCAGGTGATGCAGAATCCTCGAGTTCTGGCAGCTTTACAGGAGCGACTTGACAATGTCCCTCACACCCCTTCCA
GCTACATCGAAACTTTACCTAAAGCAGTAAAAAGAAGAATTAATGCATTGAAACAACTTCAGGTGAGATGTGCTCACATA
GAAGCCAAGTTCTATGAAGAGGTACATGACTTGGAAAGAAAGTATGCAGCGCTATACCAGCCTCTCTTTGACAAGAGAAG
AGAATTTATCACCGGCGATGTTGAACCAACAGATGCGGAATCGGAATGGCACAGTGAAAATGAAGAGGAAGAGAAATTGG
CTGGAGACATGAAAAATAAAGTAGTCGTAACAGAAAAAGAAGCAGCAACAGCTGAAGAGCCAAATCCCAAAGGAATTCCA
GAGTTCTGGTTTACCATCTTTAGAAATGTAGATATGCTAAGTGAATTAGTCCAGGAATATGATGAACCAATCTTGAAACA
CCTGCAGGATATTAAAGTGAAATTTTCTGACCCTGGACAGCCTATGTCTTTTGTGTTAGAGTTCCACTTTGAACCCAACG
ACTACTTTACCAACTCAGTCCTGACAAAAACCTACAAGATGAAATCAGAACCAGATAAGGCTGATCCCTTTTCCTTTGAA
GGTCCTGAGATTGTGGACTGTGACGGGTGTACTATTGACTGGAAGAAAGGAAAGAATGTTACTGTCAAAACCATCAAGAA
AAAGCAGAAGCATAAGGGTCGAGGCACTGTTAGAACAATTACGAAACAAGTACCCAATGAGTCCTTTTTCAACTTCTTCA
ATCCATTGAAAGCATCTGGGGATGGAGAATCACTGGATGAAGATTCTGAATTCACATTAGCCTCTGATTTTGAAATTGGA
CACTTTTTCCGTGAGCGGATAGTCCCGCGGGCTGTGCTGTACTTCACTGGGGAGGCCATAGAAGATGATGACAATTTTGA
AGAAGGTGAAGAAGGAGAAGAGGAGGAATTAGAAGGTGACGAGGAGGGAGAAGACGAGGATGATGCGGAAATTAACCCCA
AGGTGTAA
ATGGCAGATCACAGTTTTTCAGATGGGGTTCCTTCAGATTCCGTGGAAGCTGCTAAAAATGCAAGTAACACAGAAAAGCT
CACAGATCAGGTGATGCAGAATCCTCGAGTTCTGGCAGCTTTACAGGAGCGACTTGACAATGTCCCTCACACCCCTTCCA
GCTACATCGAAACTTTACCTAAAGCAGTAAAAAGAAGAATTAATGCATTGAAACAACTTCAGGTGAGATGTGCTCACATA
GAAGCCAAGTTCTATGAAGAGGTACATGACTTGGAAAGAAAGTATGCAGCGCTATACCAGCCTCTCTTTGACAAGAGAAG
AGAATTTATCACCGGCGATGTTGAACCAACAGATGCGGAATCGGAATGGCACAGTGAAAATGAAGAGGAAGAGAAATTGG
CTGGAGACATGAAAAATAAAGTAGTCGTAACAGAAAAAGAAGCAGCAACAGCTGAAGAGCCAAATCCCAAAGGAATTCCA
GAGTTCTGGTTTACCATCTTTAGAAATGTAGATATGCTAAGTGAATTAGTCCAGGAATATGATGAACCAATCTTGAAACA
CCTGCAGGATATTAAAGTGAAATTTTCTGACCCTGGACAGCCTATGTCTTTTGTGTTAGAGTTCCACTTTGAACCCAACG
ACTACTTTACCAACTCAGTCCTGACAAAAACCTACAAGATGAAATCAGAACCAGATAAGGCTGATCCCTTTTCCTTTGAA
GGTCCTGAGATTGTGGACTGTGACGGGTGTACTATTGACTGGAAGAAAGGAAAGAATGTTACTGTCAAAACCATCAAGAA
AAAGCAGAAGCATAAGGGTCGAGGCACTGTTAGAACAATTACGAAACAAGTACCCAATGAGTCCTTTTTCAACTTCTTCA
ATCCATTGAAAGCATCTGGGGATGGAGAATCACTGGATGAAGATTCTGAATTCACATTAGCCTCTGATTTTGAAATTGGA
CACTTTTTCCGTGAGCGGATAGTCCCGCGGGCTGTGCTGTACTTCACTGGGGAGGCCATAGAAGATGATGACAATTTTGA
AGAAGGTGAAGAAGGAGAAGAGGAGGAATTAGAAGGTGACGAGGAGGGAGAAGACGAGGATGATGCGGAAATTAACCCCA
AGGTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 94 .95 RPM |
| SRP007412_cerebellum | 89 .91 RPM |
| SRP007412_heart | 80 .71 RPM |
| SRP007412_kidney | 94 .38 RPM |
| SRP007412_liver | 64 .91 RPM |
| SRP007412_testis | 272 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000205531 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013223 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010841 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005624 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002938 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005240 | within_species_paralog | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_192 | 87.55 | 61.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000028747 retrocopies