Parental gene: | TTC4, ENSPTRG00000041368 |
| Aliases: | None |
| Description: | tetratricopeptide repeat domain 4 [Source:HGNC Symbol;Acc:12394] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:55207784..55234102(+) |
>ENSPTRG00000041368
ATGGAACAACCTGGGCAGGATCCCACCTCAGACGACGTCATGGACTCTTTCCTGGAAAAGTTCCAGAGCCACCCTTACCG
TGGCGGCTTTCATGAGGACCACTGGGAGAAGGAATTTGAAAAGGTCCCCCTATTTATGACGAGAGCGCCATCAGAAATTG
ATCCCAGGGAGAATCCTGACTTGGCTTGTCTCCAGTCAATTATTTTTGATGAGGAGCGTTCTCCAGAAGAACAGGCCAAG
ACCTATAAAGATGAGGGCAATGATTACTTTAAAGAAAAAGACTACAAGAAAGCTGTAATTTCATACACTGAAGGCTTAAA
GAAGAAATGTGCAGATCCTGATTTGAATGCTGTCCTTTATACCAACCGGGCAGCAGCACAGTACTATCTGGGCAATTTTT
GTTCTGCTCTCAATGATGTGACAGCTGCCAGAAAGCTAAAACCCTGCCACCTCAAAGCAATAATAAGAGGTGCCTTATGC
CATCTGGAACTGAAACACTTTGCTGAGGCCGTGAACTGGTGTGATGAGGGACTGCAAATAGATGCCAAAGAGAAGAAGCT
TCTGGAAATGAGGGCTAAAGCAGACAAGCTGAAGCGAATTGAACAGAGGGATGTGAGGAAAGCCAACCTGAAAGAAAAGA
AGGAGAGGAATCAGAATGAGGCTTTACTCCAGGCCATCAAGGCTAGGAATATCAGGCTCTCAGAAACTGCCTGTGAGGAT
GAAGATTCAGCCTCAGAAGGTCTAGGTGAGCTTTTCCTGGATGGACTCAGCACTGAGAACCCCCATGGAGCCAGGCTGAG
TCTAGATGACCAGGGCAGGCTGAGCTGGCCTGTGCTCTTTCTGTACCCAGAGTATGCCCAGTCGGACTTCATCTCTGCTT
TTCATGAGGACTCCAGGTTTATTGATCATCTGATGGTGATGTTTGGTGAAACACCCTCTTGGGACCTAGAGCAAAAATAT
TGCCCTGATAATTTGGAGGTCTACTTTGAGGATGAGGACAGGGCAGAACTATACCGGGTGCCTGCCAAGAGCACCTTGCT
ACAGGTTCTACAGCACCAGAGGTACTTTGTAAAAGCCCTGACACCAGCATTTTTGGTCTGTGTAGGATCCTCTCCTTTTT
GCAAGAATTATCTCCGGGGGAGAAAGGTGTACCAGATACGATGA
ATGGAACAACCTGGGCAGGATCCCACCTCAGACGACGTCATGGACTCTTTCCTGGAAAAGTTCCAGAGCCACCCTTACCG
TGGCGGCTTTCATGAGGACCACTGGGAGAAGGAATTTGAAAAGGTCCCCCTATTTATGACGAGAGCGCCATCAGAAATTG
ATCCCAGGGAGAATCCTGACTTGGCTTGTCTCCAGTCAATTATTTTTGATGAGGAGCGTTCTCCAGAAGAACAGGCCAAG
ACCTATAAAGATGAGGGCAATGATTACTTTAAAGAAAAAGACTACAAGAAAGCTGTAATTTCATACACTGAAGGCTTAAA
GAAGAAATGTGCAGATCCTGATTTGAATGCTGTCCTTTATACCAACCGGGCAGCAGCACAGTACTATCTGGGCAATTTTT
GTTCTGCTCTCAATGATGTGACAGCTGCCAGAAAGCTAAAACCCTGCCACCTCAAAGCAATAATAAGAGGTGCCTTATGC
CATCTGGAACTGAAACACTTTGCTGAGGCCGTGAACTGGTGTGATGAGGGACTGCAAATAGATGCCAAAGAGAAGAAGCT
TCTGGAAATGAGGGCTAAAGCAGACAAGCTGAAGCGAATTGAACAGAGGGATGTGAGGAAAGCCAACCTGAAAGAAAAGA
AGGAGAGGAATCAGAATGAGGCTTTACTCCAGGCCATCAAGGCTAGGAATATCAGGCTCTCAGAAACTGCCTGTGAGGAT
GAAGATTCAGCCTCAGAAGGTCTAGGTGAGCTTTTCCTGGATGGACTCAGCACTGAGAACCCCCATGGAGCCAGGCTGAG
TCTAGATGACCAGGGCAGGCTGAGCTGGCCTGTGCTCTTTCTGTACCCAGAGTATGCCCAGTCGGACTTCATCTCTGCTT
TTCATGAGGACTCCAGGTTTATTGATCATCTGATGGTGATGTTTGGTGAAACACCCTCTTGGGACCTAGAGCAAAAATAT
TGCCCTGATAATTTGGAGGTCTACTTTGAGGATGAGGACAGGGCAGAACTATACCGGGTGCCTGCCAAGAGCACCTTGCT
ACAGGTTCTACAGCACCAGAGGTACTTTGTAAAAGCCCTGACACCAGCATTTTTGGTCTGTGTAGGATCCTCTCCTTTTT
GCAAGAATTATCTCCGGGGGAGAAAGGTGTACCAGATACGATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 17 .45 RPM |
| SRP007412_cerebellum | 13 .01 RPM |
| SRP007412_heart | 8 .66 RPM |
| SRP007412_kidney | 13 .21 RPM |
| SRP007412_liver | 13 .13 RPM |
| SRP007412_testis | 18 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000243725 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001312 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2620 | 89.41 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000041368 retrocopies