Parental gene:

Itgb3bp, ENSRNOG00000009116

Aliases:None
Description:Centromere protein R [Source:UniProtKB/Swiss-Prot;Acc:Q5U1Z7]
Organism:Rat (Rattus norvegicus)
Coordinates:5:122404717..122470214(-)


>ENSRNOG00000009116
ATGCCAGTTAAAAGATCACTGAAACTGGACGATCAGTTTGAAGAAAATTCATTTGGTCCTTCAAAAATCATGAGGAAGAA
AAGTATTACAGCTTTTTCTCCAACTACTGGAACTTATCAATTGAGCCCATTTTCCTCTCCCAGAACCCCCAAAGAACAAG
AGCACAGAGACGGACCATCAAATGGAACAAGAAAATGGAGTGTCTTGAGCTCACCTGCAAGACAGGACTCCACAGTGAAA
GGCAGTGATGGATTCATGATGTTGCTATCTAAAATTGAGAGATCATCGGAGAAAACCATGGAGATAATGAAAAATTTAAG
TAGTCTACAGGCTTTGGAGGGCAACAGACAACTTGAAGATCTCCTTGGTGTTTCCCTAGTACCATGCTCCTTAAAAAGTG
AAGCAAAGAAAACCAAAGAGCTAATGACAAAAGTAATGAAACAAAAGCTATTTGAAAAGAAAAATTCAAGAATTCCTCCC
AAAGAACATCATCCTAACAGCTTTGAATTCCTTAAAGCCATTTTGAACTGA

Library Parental gene expression (RPM)
SRP017611_liver 1 .14 RPM
SRP017611_kidney 3 .07 RPM
SRP017611_brain 3 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000030710 ortholog_one2one 1 retrogene
retro_btau_747,
Callithrix jacchus ENSCJAG00000016555 ortholog_one2one 3 retrogenes
retro_cjac_2618, retro_cjac_3850, retro_cjac_3991,
Mus musculus ENSMUSG00000028549 ortholog_one2one 1 retrogene
retro_mmus_1547,
Tursiops truncatus ENSTTRG00000007480 ortholog_one2one 1 retrogene
retro_ttru_996,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1472 84.03 81.25
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Download FASTA sequences of all ENSRNOG00000009116 retrocopies