Parental gene: | Rsrc1, ENSRNOG00000012639 |
| Aliases: | None |
| Description: | serine/Arginine-related protein 53 [Source:RefSeq peptide;Acc:NP_001014194] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 2:183491964..183881122(+) |
>ENSRNOG00000012639
ATGGGACGCCGGTCTTCAGACACTGAAGAAGAAAGCAGAAGCAAGAGGAAAAAGAAACACAGGAGGCGGTCATCTTCAAG
CAGCTCTTCAGACAGCAGGACGTACAGCCGCAAGAAGGGTGGGAGGAGGCCAAGGTCGGAGTCACGATCCTGGTCTAGAG
ACCGCCAGCCTCGCTCACATTCTTATGAGAGAAGACGCAGGCGCAGGTCAAGCAGCAGCTCTTCTTATGGCTCCAGAAGA
AAACGCAGTCGCAGTCGTTCCAGGGGCCGAGGGAAGTCCTATAGAGTTCAGAGGTCTCGGTCAAAAAGCAGAACAAGAAG
GTCCAGGTCAAGACCTCGTCCACGCTCACATAGTAGAAGCAGTGAAAGATCCAGTCACAGAAGAACTCGTAGTAGGTCCA
GGGACAGAGACAGACGTAAAGTTCGGGACAAAGAGAAGAGAGAAAAGGAGAAGGATAAAGGCAAAGACAAAGAGGCGCAC
ACCATCAAACGCGGGGATTGTGGAAACATCAAAGCTGGATTAGAACATCTGCCTCCAGCTGAGCAGGCCAAAGCCAGACT
TCAATTGGTCCTTGAAGCTGCTGCAAAAGCTGATGAAGCATTAAAAGCCAAAGAAAGGAATGAGGAAGAAGCAAAGAGAA
GAAAAGAAGAAGACCAAGCCACCCTGGGAGAACAAGTAAAAAGAGTAAAAGAAATCGAAGCAATTGAAAGTGATTCTTTT
GTTCAGCAGACATTCAGATCAAGTAAAGATGTCAAAAAGTCGGTAGAGCCGAGTGAGGTGAAGCATGTGACTCCAGCCTC
AGGACCAGCATCAGTAGCTGCTGACCCACCCAGCACTGGAAAGGAAATAGACCCTGACAGCATCCCCACGGCTATCAAGT
ACCAAGATGACAATTCTCTAGCTCATCCAAATTATTTTATTGAAAAAGCTGAAGCTGAGGAAAAGTGGTTCAAGAGATTG
ATTGCTCTCCGACAAGAAAGATTGATGGGCAGTCCTGTGGCCTAA
ATGGGACGCCGGTCTTCAGACACTGAAGAAGAAAGCAGAAGCAAGAGGAAAAAGAAACACAGGAGGCGGTCATCTTCAAG
CAGCTCTTCAGACAGCAGGACGTACAGCCGCAAGAAGGGTGGGAGGAGGCCAAGGTCGGAGTCACGATCCTGGTCTAGAG
ACCGCCAGCCTCGCTCACATTCTTATGAGAGAAGACGCAGGCGCAGGTCAAGCAGCAGCTCTTCTTATGGCTCCAGAAGA
AAACGCAGTCGCAGTCGTTCCAGGGGCCGAGGGAAGTCCTATAGAGTTCAGAGGTCTCGGTCAAAAAGCAGAACAAGAAG
GTCCAGGTCAAGACCTCGTCCACGCTCACATAGTAGAAGCAGTGAAAGATCCAGTCACAGAAGAACTCGTAGTAGGTCCA
GGGACAGAGACAGACGTAAAGTTCGGGACAAAGAGAAGAGAGAAAAGGAGAAGGATAAAGGCAAAGACAAAGAGGCGCAC
ACCATCAAACGCGGGGATTGTGGAAACATCAAAGCTGGATTAGAACATCTGCCTCCAGCTGAGCAGGCCAAAGCCAGACT
TCAATTGGTCCTTGAAGCTGCTGCAAAAGCTGATGAAGCATTAAAAGCCAAAGAAAGGAATGAGGAAGAAGCAAAGAGAA
GAAAAGAAGAAGACCAAGCCACCCTGGGAGAACAAGTAAAAAGAGTAAAAGAAATCGAAGCAATTGAAAGTGATTCTTTT
GTTCAGCAGACATTCAGATCAAGTAAAGATGTCAAAAAGTCGGTAGAGCCGAGTGAGGTGAAGCATGTGACTCCAGCCTC
AGGACCAGCATCAGTAGCTGCTGACCCACCCAGCACTGGAAAGGAAATAGACCCTGACAGCATCCCCACGGCTATCAAGT
ACCAAGATGACAATTCTCTAGCTCATCCAAATTATTTTATTGAAAAAGCTGAAGCTGAGGAAAAGTGGTTCAAGAGATTG
ATTGCTCTCCGACAAGAAAGATTGATGGGCAGTCCTGTGGCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .23 RPM |
| SRP017611_kidney | 8 .09 RPM |
| SRP017611_brain | 13 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000004797 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000000876 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000017217 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000174891 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000034544 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004137 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001973 | ortholog_one2one | 13 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_577 | 88.03 | 77.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2454 | 82.83 | 58.68 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000012639 retrocopies