Parental gene: | Vil1, ENSRNOG00000015408 |
| Aliases: | Vil1, Vil |
| Description: | villin-1 [Source:RefSeq peptide;Acc:NP_001101694] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 9:81454350..81482170(+) |
>ENSRNOG00000015408
ATGACTAAACTGACTGCCCAAGTCAAAGGCTCTCTCAACACCACCACTCCAGGAATACAAATATGGAGGATAGAGGCTAT
GCAGATGGTGCCGGTTCCTTCCAGCACCTTTGGAAGCTTCTTCGATGGTGACTGCTATGTAGTCCTGGCTATCCACAAGA
CCGGCAGCACCCTCTCCTACGATATCCACTACTGGATTGGCCAGGACTCGTCCCAGGATGAGCAGGGGGCAGCTGCCATC
TACACAACACAGATGGATGACTACCTGAAGGGCCGGGCTGTCCAGCACCGTGAGGTCCAAGGCCATGAGAGCGACACATT
CCGGAGCTACTTCAAGCAAGGCCTTGTGATCCGGAAAGGGGGCGTGGCTTCTGGCATGAAGCACGTAGAAACAAACTCCT
GTGATGTCCAGCGACTGTTGCACGTCAAGGGCAAGAGGAATGTGCTGGCTGGAGAGGTGGAAATGTCCTGGAAGAGTTTC
AACAGAGGGGATGTCTTCCTGCTGGACCTTGGGAAGCTTATCATCCAGTGGAATGGGCCAGAGAGTAACCGCATGGAGAG
ACTTCGGGGCATGACCTTGGCCAAAGAGATCCGAGACCAGGAGCGGGGTGGACGCACCTACGTAGGCGTGGTGGATGGGG
AGAATGAAGGGGACTCCCCACAGCTGATGGCAATTATGAACCACGTGCTGGGCCCACGCAAGGAACTAAAGGCTGCAATT
TCTGACTCAGTGGTGGAGCCGGCCGCTAAGGCTGCACTCAAGCTGTACCATGTGTCTGATTCAGAAGGAAAAATGGTGGT
TAGAGAAGTTGCTACTCAGCCACTCACACAGGACTTGCTCAGCCATGAGGACTGTTACATCCTGGACCAGGGAGGCCTGA
AGATCTTTGTGTGGAAGGGAAAAAATGCCAATGCCCAGGAGAGGAGCGGAGCCATGAACCAGGCTTTGAACTTCATCAAA
GCCAAGCAGTACCCACCTAGCACGCAGGTTGAGGTGCAGAATGATGGGGCTGAGTCCGCCATTTTCCAGCAGCTCTTCCA
GAAGTGGACAGTGCCCAATCGGACCTCAGGCCTTGGCAAAACCCACACAGTGGGCTCTGTGGCCAAGGTGGAACAGGTGA
AGTTTGATGCTCTGTCCATGCACGTACGGCCTCAAGTGGCTGCCCAGCAGAAAATGGTGGATGACGGGAGTGGGGAAGTG
CAGGTGTGGCGCATCGAGGACTTAGAGCTGGTGCCTGTGGAGTCCAAGTGGCTGGGCCATTTCTATGGCGGCGACTGCTA
CCTGCTGCTCTATACCTACCTCATAGGCGAGAAGGAGCACTACTTGCTGTATATCTGGCAGGGCAGCCAGGCCAGCCAGG
ATGAAATTGCAGCCTCGGCTTACCAAGCTGTCAACCTGGACCAGAAGTACAACGACGAGCCAGTGCAGATCCGGGTCACG
ATGGGCAAGGAGCCGCCGCACCTCATGTCTATCTTCAAGGGGCGCATGGTGGTTTATCAGGGAGGCACCTCCCGAAAGAA
CAACGTGGAGCCCGTGCCCTCTACAAGGCTGTTTCAGGTCCGAGGGACCAGTGCTGATAACACCAAGGCTTTTGAGGTTA
CAGCCCGGGCCACCTCCCTCAACTCCAATGATGTCTTCATACTCAAGACTCCGTCCTGCTGCTACCTGTGGTGTGGAAAG
GGCTGCAGTGGGGATGAGCGGGAGATGGCCAAGATGGTTGCTGATACCATCTCTCGGACAGAGAAACAAGTGGTGGTCGA
GGGGCAGGAGCCAGCCAACTTCTGGATGGCTCTGGGTGGGAAGGCGCCATATGCCAACACCAAGAGGCTGCAGGAGGAAA
ACCAAGTCATCACTCCTCGGCTCTTTGAGTGCTCCAACCAGACTGGGCGCTTTCTGGCCACAGAGATCTTTGACTTCACT
CAGGACGACCTGGAAGAGGATGATGTGTTCCTATTGGATGTCTGGGACCAGGTCTTCTTCTGGATAGGGAAACACGCCAA
CGAGGAAGAGAAGAAGGCTGCAGCTACAACTGCACAGGAATACCTCAAGACCCACCCCGGAAACAGAGACCCTGAGACCC
CTATCATTGTGGTGAAGCAGGGGCACGAGCCCTCCACCTTCACAGGCTGGTTCCTGGCTTGGGATCCCTTCAAGTGGAGT
AACACCAAATCTTATGATGACCTCAAGGCCGAGTTGGGAAACTCTGGGGACTGGAGCCAGATTGCTGATGAGGTTATGAG
CCCCAAAGTGGATGTTTTCACTGCCAATACCAGCTTCAGTTCTGGGCCCTTGCCCATCTATCCCCTGGAGCAGCTGGTAA
ACAAGCCTGTGGAGGAGCTCCCTGAGGGTGTGGACCCCACCAGGAAGGAGGAGCACCTGTCCACTGAAGATTTCACTAAG
GCTTTGGGGATGACTCCAGCTGCCTTCTCTGCGCTGCCTCGATGGAAGCAACAAAACCTCAAGAAGGAGAAAGGACTGTT
TTGA
ATGACTAAACTGACTGCCCAAGTCAAAGGCTCTCTCAACACCACCACTCCAGGAATACAAATATGGAGGATAGAGGCTAT
GCAGATGGTGCCGGTTCCTTCCAGCACCTTTGGAAGCTTCTTCGATGGTGACTGCTATGTAGTCCTGGCTATCCACAAGA
CCGGCAGCACCCTCTCCTACGATATCCACTACTGGATTGGCCAGGACTCGTCCCAGGATGAGCAGGGGGCAGCTGCCATC
TACACAACACAGATGGATGACTACCTGAAGGGCCGGGCTGTCCAGCACCGTGAGGTCCAAGGCCATGAGAGCGACACATT
CCGGAGCTACTTCAAGCAAGGCCTTGTGATCCGGAAAGGGGGCGTGGCTTCTGGCATGAAGCACGTAGAAACAAACTCCT
GTGATGTCCAGCGACTGTTGCACGTCAAGGGCAAGAGGAATGTGCTGGCTGGAGAGGTGGAAATGTCCTGGAAGAGTTTC
AACAGAGGGGATGTCTTCCTGCTGGACCTTGGGAAGCTTATCATCCAGTGGAATGGGCCAGAGAGTAACCGCATGGAGAG
ACTTCGGGGCATGACCTTGGCCAAAGAGATCCGAGACCAGGAGCGGGGTGGACGCACCTACGTAGGCGTGGTGGATGGGG
AGAATGAAGGGGACTCCCCACAGCTGATGGCAATTATGAACCACGTGCTGGGCCCACGCAAGGAACTAAAGGCTGCAATT
TCTGACTCAGTGGTGGAGCCGGCCGCTAAGGCTGCACTCAAGCTGTACCATGTGTCTGATTCAGAAGGAAAAATGGTGGT
TAGAGAAGTTGCTACTCAGCCACTCACACAGGACTTGCTCAGCCATGAGGACTGTTACATCCTGGACCAGGGAGGCCTGA
AGATCTTTGTGTGGAAGGGAAAAAATGCCAATGCCCAGGAGAGGAGCGGAGCCATGAACCAGGCTTTGAACTTCATCAAA
GCCAAGCAGTACCCACCTAGCACGCAGGTTGAGGTGCAGAATGATGGGGCTGAGTCCGCCATTTTCCAGCAGCTCTTCCA
GAAGTGGACAGTGCCCAATCGGACCTCAGGCCTTGGCAAAACCCACACAGTGGGCTCTGTGGCCAAGGTGGAACAGGTGA
AGTTTGATGCTCTGTCCATGCACGTACGGCCTCAAGTGGCTGCCCAGCAGAAAATGGTGGATGACGGGAGTGGGGAAGTG
CAGGTGTGGCGCATCGAGGACTTAGAGCTGGTGCCTGTGGAGTCCAAGTGGCTGGGCCATTTCTATGGCGGCGACTGCTA
CCTGCTGCTCTATACCTACCTCATAGGCGAGAAGGAGCACTACTTGCTGTATATCTGGCAGGGCAGCCAGGCCAGCCAGG
ATGAAATTGCAGCCTCGGCTTACCAAGCTGTCAACCTGGACCAGAAGTACAACGACGAGCCAGTGCAGATCCGGGTCACG
ATGGGCAAGGAGCCGCCGCACCTCATGTCTATCTTCAAGGGGCGCATGGTGGTTTATCAGGGAGGCACCTCCCGAAAGAA
CAACGTGGAGCCCGTGCCCTCTACAAGGCTGTTTCAGGTCCGAGGGACCAGTGCTGATAACACCAAGGCTTTTGAGGTTA
CAGCCCGGGCCACCTCCCTCAACTCCAATGATGTCTTCATACTCAAGACTCCGTCCTGCTGCTACCTGTGGTGTGGAAAG
GGCTGCAGTGGGGATGAGCGGGAGATGGCCAAGATGGTTGCTGATACCATCTCTCGGACAGAGAAACAAGTGGTGGTCGA
GGGGCAGGAGCCAGCCAACTTCTGGATGGCTCTGGGTGGGAAGGCGCCATATGCCAACACCAAGAGGCTGCAGGAGGAAA
ACCAAGTCATCACTCCTCGGCTCTTTGAGTGCTCCAACCAGACTGGGCGCTTTCTGGCCACAGAGATCTTTGACTTCACT
CAGGACGACCTGGAAGAGGATGATGTGTTCCTATTGGATGTCTGGGACCAGGTCTTCTTCTGGATAGGGAAACACGCCAA
CGAGGAAGAGAAGAAGGCTGCAGCTACAACTGCACAGGAATACCTCAAGACCCACCCCGGAAACAGAGACCCTGAGACCC
CTATCATTGTGGTGAAGCAGGGGCACGAGCCCTCCACCTTCACAGGCTGGTTCCTGGCTTGGGATCCCTTCAAGTGGAGT
AACACCAAATCTTATGATGACCTCAAGGCCGAGTTGGGAAACTCTGGGGACTGGAGCCAGATTGCTGATGAGGTTATGAG
CCCCAAAGTGGATGTTTTCACTGCCAATACCAGCTTCAGTTCTGGGCCCTTGCCCATCTATCCCCTGGAGCAGCTGGTAA
ACAAGCCTGTGGAGGAGCTCCCTGAGGGTGTGGACCCCACCAGGAAGGAGGAGCACCTGTCCACTGAAGATTTCACTAAG
GCTTTGGGGATGACTCCAGCTGCCTTCTCTGCGCTGCCTCGATGGAAGCAACAAAACCTCAAGAAGGAGAAAGGACTGTT
TTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .54 RPM |
| SRP017611_kidney | 126 .17 RPM |
| SRP017611_brain | 0 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Rattus norvegicus | ENSRNOG00000013668 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2045 | 92.88 | 81.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000015408 retrocopies