Parental gene:

Ap2s1, ENSRNOG00000015865

Aliases:Ap2s1, Ap17
Description:AP-2 complex subunit sigma [Source:UniProtKB/Swiss-Prot;Acc:P62744]
Organism:Rat (Rattus norvegicus)
Coordinates:1:79918161..79929502(+)


>ENSRNOG00000015865
ATGATCCGATTCATTCTCATCCAGAACCGGGCAGGCAAGACACGCCTGGCCAAGTGGTATATGCAGTTCGATGATGACGA
GAAGCAGAAGTTGATCGAGGAAGTGCACGCCGTGGTCACCGTCAGGGATGCCAAGCACACCAACTTTGTGGAGTTCCGGA
ACTTCAAGATCATCTACCGGCGCTACGCTGGCCTCTACTTCTGCATCTGCGTTGACGTCAACGACAACAATCTGGCCTAT
CTTGAGGCCATCCACAACTTCGTAGAAGTGTTAAATGAATACTTCCACAATGTCTGTGAACTGGACCTGGTGTTCAACTT
CTACAAGGTTTACACGGTGGTAGATGAGATGTTCCTGGCAGGAGAGATCCGAGAGACGAGCCAGACGAAGGTGCTGAAGC
AGCTGCTGATGCTGCAGTCGCTGGAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 65 .86 RPM
SRP017611_kidney 66 .29 RPM
SRP017611_liver 24 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008394 ortholog_one2one 1 retrogene
retro_amel_409,
Macropus eugenii ENSMEUG00000001062 ortholog_one2one 2 retrogenes
retro_meug_1156, retro_meug_1993,
Mus musculus ENSMUSG00000008036 ortholog_one2one 1 retrogene
retro_mmus_2739,
Rattus norvegicus ENSRNOG00000005765 within_species_paralog 1 retrogene
retro_rnor_2200,
Tursiops truncatus ENSTTRG00000012548 ortholog_one2one 1 retrogene
retro_ttru_924,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1030 81.90 80.28
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2. retro_rnor_1516 85.61 97.89
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Download FASTA sequences of all ENSRNOG00000015865 retrocopies