Parental gene: | USP4, ENSSARG00000007703 |
| Aliases: | None |
| Description: | ubiquitin specific peptidase 4 (proto-oncogene) [Source:HGNC Symbol;Acc:12627] |
| Organism: | Shrew (Sorex araneus) |
| Coordinates: | GeneScaffold_1989:980..51376(-) |
>ENSSARG00000007703
ATGGCGGAAGGCGGAGGCTGCCGTGAGCGACCGGATGCGGAGACCCAGAAAACCGAGCTGGGGGCCCTGATGAGGACCAC
GCTCCAGCGAGGGGCGCAGTGGTATCTTATTGACAGTCGGTGGTTTAAGCAGTGGAAGAAATATGTGGGCTTCGACAGCT
GGGATATGTACAATGTGGGTGAACACAACCTGTTTCCTGGCCCAATAGATAACTCTGGACTCTTTTCAGATCCAGAGAGT
CAGACCCTGAAAGAACATTTAATTGATGAATTGGATTATGTATTGGTTCCAACTGAGGCCTGGAACAAGTTGTTAAACTG
GTATGGTTGTGTTGAAGGGCAACAGCCCATTGTGAGAAAGGTTGTGGAGCATGGCCTGTTTGTCAAACACTGCAAAGTGG
AAGTGTACTTGCTGGAACTGAAGCTCTGTGAGAATAGTGACCCCACCAATGTTCTGAGTTGCCATTTCAGCAAGGCAGAT
ACCATTGCAACCATTGAGAGGGAGATGCGGAAACTGTTCAACATTCCTGCAGAACGTGAAACAAGACTGTGGAACAAATA
CATGAGCAATACCTATGAGCAGTTGAGCAAGCTCGATAACACTGTTCAGGATGCGGGGCTTTACCAGGGCCAGGTGCTAG
TAATTGAGCCTCAGAATGAAGATGGTACATGGCCGAGGCAGACCCTTCAGACAAAATCAAGCACTGCGCCTAGCAGAAAT
TTCACTACCTCTCCCAAATCGTCAGCGAGCCCCTACACCTCAGCGGCTGCCTCTCCCGTTGCAAATGGTGATAGCACTAA
CACTTCTGGGGTGCACAGTTCCAGTGTCAGCCGGGGTGGCTCTGGCTTCTCTGCTTCGTATAATTGTCAGGAGGCCTCGT
CATCTCAGGTACAACCTGGGATCTGTGGACTCGGAAACCTGGGGAACACCTGCTTCATGAACTCGGCTTTGCAGTGCTTG
AGCAACACCGCGCCACTGACGGACTACTTCCTTGACGATGAATATGAAGCGGAGATCAACAGAGACAACCCGCTGGGGAT
GAAAGGGGAAATCGCAGAGGCCTATGCAGAGCTCATTAAGCAGATGTGGTCTGGCAGGGATGCCCATGTGGCACCACGTA
TGTTCAAAACACAAGTGGGACGTTTTGCCCCCCAGTTTTCTGGCTACCAGCAGCAAGACTCTCAGGAGCTGTTAGCCTTT
CTTCTGGATGGATTGCATGAAGATCTGAACCGAGTGAAGAAGAAGCCCTACCTGGAGCTGAAGGACGCCAATGGGCGGCC
AGATGCGGTGGTAGCAAAGGAAGCCTGGGAGAACCACAGGTTAAGGAATGATTCTGTGATTGTGGATACATTCCATGGCC
TCTTCAAGTCTACTTTGGTTTGCCCTGAGTGTGCAAAGGTTTCAGTGACCTTTGACCCATTTTGCTATCTCACTCTCCCA
CTGCCCTTGAAGAAAGATCGAGTTATGGAGGTCTTCCTGGTTCCTGCTGACCCTCGCTGCAGACCTACTCAGTACCGCGT
GATTGTGCCACTGATGGGGGCCGTGTCCGATCTCTGCGAGGCGCTCTCCAGGCTGTCTGGCATTGCTGCAGAAAATATGG
TGGTCACTGATGTGTATAACCATCGATTCCACAAAATTTTCCAAATGGATGAAGGTTTGAACCACATCATGCCTCGGGAT
GACATNNNNNNGTATGAAGTCTGCAGCACTTCACTGATGGTACCAGAGTACATCACACTTCCAATCTACTTCAGGGAGAG
GAAGTCCAGGCCCTCGAGTACATCCTCGGTAGCAGTGCTTTATGGACAGCCACTGCTGGTTTCCGTCCCCAAGCACAAAT
TAACCGTCGATTCTTTGTACCAGGCTGTCTGTGAGCGTATCAGGCGCTATAAACAGCTTGCTGATGAGTCTGGCAGCTCG
CCCTTGAAGGGGTCCTGCAATCTCAGGGCCAGCTGTGAAGATGAAGAAGAAATGGAGCATCAGGAAGAAGGTAAAGAGCA
GCTGTCTGAGACGGAAGGCAGTGGCGAGGAGGAGCTGGGAAATGACCAGGGTGAGACTACCCAGAAGGTCCGAGACCAGC
GCTGTCCCAGGAGGCTTTTTACCTTCAGCCTTGTGAACTCCTACGGAACAGCTGACATCAATTCACTGGCAACAGATGGA
AAACTACTTAAACTCAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGCCTATGAGAAGCACGTGAGCATGTTGCAGCCGCAGAAGAAGAAGAAGATGGCCGTGGCGCTCAGAGATT
GCATCGAGCTCTTCACCACGATGGAGACCCTTGGAGAACATGACCCCTGGTACTGTCCCAACTGTAAGAAGCATCAGCAG
GCCACAAAGAAGTTTGATCTGTGGTCCTTGCCCAAGATACTGGTGGTCCACCTCAAACGTTTCTCCTACAACAGATACTG
GAGAGATAAACTTGACACTGTTGTGGAGTTCCCAGTCAGAGGTCTGAACATGTCCGAGTTTGTCTGTGACCGATCAGCAA
GACCATATGTGTATGACCTCATCGCCGTGTCCAATCATTATGGAGCCATGGGGGTTGGCCACTACACTGCTTATGCGAAG
AACAAACTGAATGGGAAATGGTATTATTTTGATGATAGCAACGTGTCCGCCTCTGAGGATCAGATAGTGACAAAAGCTGC
TTATGTGCTGTTTTACCAGCGTCGAGATGATGAATTTTATAAGACTCCTTCACATACAAGTTTTCCTGGACCTTCTGACG
GAGGGATGAGGCCCAGCGGCTCGCAGCAGGGCATGGGGGATGACGAGGCATGCAGCATGGACACCAACTGA
ATGGCGGAAGGCGGAGGCTGCCGTGAGCGACCGGATGCGGAGACCCAGAAAACCGAGCTGGGGGCCCTGATGAGGACCAC
GCTCCAGCGAGGGGCGCAGTGGTATCTTATTGACAGTCGGTGGTTTAAGCAGTGGAAGAAATATGTGGGCTTCGACAGCT
GGGATATGTACAATGTGGGTGAACACAACCTGTTTCCTGGCCCAATAGATAACTCTGGACTCTTTTCAGATCCAGAGAGT
CAGACCCTGAAAGAACATTTAATTGATGAATTGGATTATGTATTGGTTCCAACTGAGGCCTGGAACAAGTTGTTAAACTG
GTATGGTTGTGTTGAAGGGCAACAGCCCATTGTGAGAAAGGTTGTGGAGCATGGCCTGTTTGTCAAACACTGCAAAGTGG
AAGTGTACTTGCTGGAACTGAAGCTCTGTGAGAATAGTGACCCCACCAATGTTCTGAGTTGCCATTTCAGCAAGGCAGAT
ACCATTGCAACCATTGAGAGGGAGATGCGGAAACTGTTCAACATTCCTGCAGAACGTGAAACAAGACTGTGGAACAAATA
CATGAGCAATACCTATGAGCAGTTGAGCAAGCTCGATAACACTGTTCAGGATGCGGGGCTTTACCAGGGCCAGGTGCTAG
TAATTGAGCCTCAGAATGAAGATGGTACATGGCCGAGGCAGACCCTTCAGACAAAATCAAGCACTGCGCCTAGCAGAAAT
TTCACTACCTCTCCCAAATCGTCAGCGAGCCCCTACACCTCAGCGGCTGCCTCTCCCGTTGCAAATGGTGATAGCACTAA
CACTTCTGGGGTGCACAGTTCCAGTGTCAGCCGGGGTGGCTCTGGCTTCTCTGCTTCGTATAATTGTCAGGAGGCCTCGT
CATCTCAGGTACAACCTGGGATCTGTGGACTCGGAAACCTGGGGAACACCTGCTTCATGAACTCGGCTTTGCAGTGCTTG
AGCAACACCGCGCCACTGACGGACTACTTCCTTGACGATGAATATGAAGCGGAGATCAACAGAGACAACCCGCTGGGGAT
GAAAGGGGAAATCGCAGAGGCCTATGCAGAGCTCATTAAGCAGATGTGGTCTGGCAGGGATGCCCATGTGGCACCACGTA
TGTTCAAAACACAAGTGGGACGTTTTGCCCCCCAGTTTTCTGGCTACCAGCAGCAAGACTCTCAGGAGCTGTTAGCCTTT
CTTCTGGATGGATTGCATGAAGATCTGAACCGAGTGAAGAAGAAGCCCTACCTGGAGCTGAAGGACGCCAATGGGCGGCC
AGATGCGGTGGTAGCAAAGGAAGCCTGGGAGAACCACAGGTTAAGGAATGATTCTGTGATTGTGGATACATTCCATGGCC
TCTTCAAGTCTACTTTGGTTTGCCCTGAGTGTGCAAAGGTTTCAGTGACCTTTGACCCATTTTGCTATCTCACTCTCCCA
CTGCCCTTGAAGAAAGATCGAGTTATGGAGGTCTTCCTGGTTCCTGCTGACCCTCGCTGCAGACCTACTCAGTACCGCGT
GATTGTGCCACTGATGGGGGCCGTGTCCGATCTCTGCGAGGCGCTCTCCAGGCTGTCTGGCATTGCTGCAGAAAATATGG
TGGTCACTGATGTGTATAACCATCGATTCCACAAAATTTTCCAAATGGATGAAGGTTTGAACCACATCATGCCTCGGGAT
GACATNNNNNNGTATGAAGTCTGCAGCACTTCACTGATGGTACCAGAGTACATCACACTTCCAATCTACTTCAGGGAGAG
GAAGTCCAGGCCCTCGAGTACATCCTCGGTAGCAGTGCTTTATGGACAGCCACTGCTGGTTTCCGTCCCCAAGCACAAAT
TAACCGTCGATTCTTTGTACCAGGCTGTCTGTGAGCGTATCAGGCGCTATAAACAGCTTGCTGATGAGTCTGGCAGCTCG
CCCTTGAAGGGGTCCTGCAATCTCAGGGCCAGCTGTGAAGATGAAGAAGAAATGGAGCATCAGGAAGAAGGTAAAGAGCA
GCTGTCTGAGACGGAAGGCAGTGGCGAGGAGGAGCTGGGAAATGACCAGGGTGAGACTACCCAGAAGGTCCGAGACCAGC
GCTGTCCCAGGAGGCTTTTTACCTTCAGCCTTGTGAACTCCTACGGAACAGCTGACATCAATTCACTGGCAACAGATGGA
AAACTACTTAAACTCAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGCCTATGAGAAGCACGTGAGCATGTTGCAGCCGCAGAAGAAGAAGAAGATGGCCGTGGCGCTCAGAGATT
GCATCGAGCTCTTCACCACGATGGAGACCCTTGGAGAACATGACCCCTGGTACTGTCCCAACTGTAAGAAGCATCAGCAG
GCCACAAAGAAGTTTGATCTGTGGTCCTTGCCCAAGATACTGGTGGTCCACCTCAAACGTTTCTCCTACAACAGATACTG
GAGAGATAAACTTGACACTGTTGTGGAGTTCCCAGTCAGAGGTCTGAACATGTCCGAGTTTGTCTGTGACCGATCAGCAA
GACCATATGTGTATGACCTCATCGCCGTGTCCAATCATTATGGAGCCATGGGGGTTGGCCACTACACTGCTTATGCGAAG
AACAAACTGAATGGGAAATGGTATTATTTTGATGATAGCAACGTGTCCGCCTCTGAGGATCAGATAGTGACAAAAGCTGC
TTATGTGCTGTTTTACCAGCGTCGAGATGATGAATTTTATAAGACTCCTTCACATACAAGTTTTCCTGGACCTTCTGACG
GAGGGATGAGGCCCAGCGGCTCGCAGCAGGGCATGGGGGATGACGAGGCATGCAGCATGGACACCAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000013001 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000003703 | within_species_paralog | 12 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sara_550 | 91.96 | 69.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSARG00000007703 retrocopies