Parental gene: | USP48, ENSSARG00000008022 |
| Aliases: | None |
| Description: | ubiquitin specific peptidase 48 [Source:HGNC Symbol;Acc:18533] |
| Organism: | Shrew (Sorex araneus) |
| Coordinates: | GeneScaffold_922:22590..77921(-) |
>ENSSARG00000008022
ATGGCCCCGCGGCTGCAGCTGGAGAAGGCGGCCTGGCGCTGGGCGGAGACGGTGCGGCCCGAGGAGGTGTCGCAGGAGCA
CATCGAGACCGCCTACCGCATCTGGCTGGAGCCCTGCATCCGCGGCGTGTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNATTATGAGCCTCAGACCATTTGTGAACATCTCCAATATTTGTTTGCCTTGTTACAAAACAGTAATCGG
CGATACATTGATCCATCAGGCTTTGTTAAGGCCTTAGGCTTAGACACAGGTCAACAGCAGGATGCCCAAGAATTTTCAAA
GCTCTTTATGTCACTATTGGAAGATACTTTGTCTAAGCAAAAGAATCCAGATGTCCGGAATATTGTCCAGCAACAGTTCT
GTGGGGAGTATGCTTATGTCACTGTTTGCAACCAGTGTGGCAGAGAGTCTAAACTTTCATCCAAATTTTATGAACTGGAG
TTAAATATTCAAGGCCACAAACAGTTAACAGATTGTATCTCAGAATTTTTGAAGGAAGAGAAATTGGAAGGAGACAATCG
ATACTTTTGTGAAAACTGTCAAAGCAAACAGAATGCAACAAGGAAGATCCGGCTTCTTAGCCTGCCCTGTACTCTGAACC
TACAGCTAATGCGCTTTGTCTTTGATCGGCAAACTGGACATAAGAAAAAATTGAATACGTACATTGGCTTCTCAGAAATT
TTGGATATGGAGCCTTATGTGGAACACAAAGGCGGGGCACATGTGTATGAGCTCAGTGCCGTGCTCATCCACAGAGGCGT
GAGCGCCTACTCAGGCCACTACATTGCCCATGTGAAAGACCCGCAGTCAGGTGAATGGTACAAGTTTAATGATGAAGATA
TCGAGAAGATGGAGGGGAAGAAATTGCAACTAGGGATTGAGGAAGATCTAGCAGAACCTTCTAAATCCCAGACACGAAAA
CCCAAGTGCGGCAAAGGATCGCACTGCTCGCGAAACGCGTACATGTTGGTCTACAGACTACAGTCTCGAGAGAAAATCAG
CACGACTGTGCAGGTACCAGCTTTTCTTCAAGAGCTGGTGGACCGAGATAATTCTAAATTTGAAGAGTGGTGTATTGAAA
TGGCCGAGATGCGAAAGCAGAGCGTGGATAAAGGGAAAGCAAAGCACGAAGAGGTTAAGGAGCTGTACCAAAGGTTACCT
GCTGGAGCTGAGCCCTACGAGTTTGTTTCCCTGGAATGGCTCCAAAAGTGGTTGGATGAGTCTACGCCGACCAAGCCAAT
TGATAATCATGCTTGCCTGTGTTCCCACGACAAGCTTCATCCTGATAAAATATCTATTATGAAGAGAATATCTGAGTATG
CAGCTGATATTTTCTACAGTAGATATGGAGGTGGACCAAGACTAACTGTGAAAGCCCTGTGCAAGGAATGTGTAGTAGAG
CGTTGTCGTTTGTTGCGGCTGAAGAACCAACTAAATGAAGATTATAAAACTGTCAATAATCTGTTAAAAACAACAGTAAA
GGGCAATGACGGATTCTGGGTGGGAAAATCCTCCTTGAGGAGTTGGCGCCAACTCGCTCTGGAGCAGCTCGATGAGCAAG
ACAGTGAAGCCGACCAAAACAACGGAAAGATGAACGGTGACTCCTTGGGTAAAGATGAATCAAAGGAAGAAAGAAAAGAA
GAGGAGGAAGAGCTAAATTTTAATGAAGACATTCTGTGTCCGCATGGAGAGTTATGCATATCTGAAAATGAAAGGCGGCT
TGTTTCCCAGGAAGCGTGGAGCAAGCTGCAGCAGTACTTCCCCAAGGCGCCTGAGTTTCCGAGTCACAGAGAGTGCTGCT
CGCAGTGCAAGATTCTAGAAAGAGAAGGGGAAGAAAATGAAGCCTTACATAAGATGATTGCGAATGAGCAAAAAACGTCG
CTACCGAATTTATTCCAGGACAAAAACAGACCATGTCTCAGCAACTGGCCAGAGGATACTGATGTCCTGTACATCGTCTC
ACAGTTCTTTGTAGAAGAATGGAGGAAGTTTGTTAGGAAACCCACGCGCTGCAGCCCCGTGTCAGCCGTGGGGAACAGTG
CTCTCCTGTGTCCCCACGGTGGCCTCATGTTCACTTTCACTTCCATGACCAAAGAAGACTCCAAACTTATAGCTCTCATA
TGGCCCACTGAGTGGCAAATGATTCAAAAGCTCTTCGTCGTTGATCATATAATTAAAATCACCCGGACTACAGTTGGAGA
CATGAATCCTTCAGAGACCCAGTATATTTCTGAGCCTAAACTCTGTCCAGAATGCAGAGAAGGCTTATTGTGTCAGCAAC
AGAGGGACCTCCGCGAATACACTCAAGCCACCATCTATGTCCACAAAGTGGTAGATAATAAAAAGGTCATGAAAGATGCT
GCTCCCGAGTTGAACGTGAGCAGTTCCGAAACAGAGGAGGATAAAGAAGAAACTAAACCAGATGGAGAGAAGGATCCAGA
TTTTAATCAGAGCAATGGCGGAACAAAGCGGCAAAAAATATCCCATCAAAATTACATAGCCTATCAAAAGCAAGTTATTC
GGCGAAGTATGCGACATAGAAAAGTTCGCGGTGAGAAAGCACTTCTTGTTTCTGCTAATCAAACCTTAAAAGAACTGAAA
ATTCAGATCATGCATGCATTTTCAGTTGCTCCCTTTGATCAGAACCTGTCAATCGATGGAAAGATTTTGAGTGATGATTG
TGCCACCCTTGGCACCCTTGGCGTCATTCCGGAGTCTGTCATTTTATTAAAGGCTGATGAGCCAATTGCCGATTATGCTG
CAATGGACGATGTCATGCAAGTGTGTATGCCAGAAGAAGGATTTAAAGGTACTGGCCTACTGGGACATTAA
ATGGCCCCGCGGCTGCAGCTGGAGAAGGCGGCCTGGCGCTGGGCGGAGACGGTGCGGCCCGAGGAGGTGTCGCAGGAGCA
CATCGAGACCGCCTACCGCATCTGGCTGGAGCCCTGCATCCGCGGCGTGTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNATTATGAGCCTCAGACCATTTGTGAACATCTCCAATATTTGTTTGCCTTGTTACAAAACAGTAATCGG
CGATACATTGATCCATCAGGCTTTGTTAAGGCCTTAGGCTTAGACACAGGTCAACAGCAGGATGCCCAAGAATTTTCAAA
GCTCTTTATGTCACTATTGGAAGATACTTTGTCTAAGCAAAAGAATCCAGATGTCCGGAATATTGTCCAGCAACAGTTCT
GTGGGGAGTATGCTTATGTCACTGTTTGCAACCAGTGTGGCAGAGAGTCTAAACTTTCATCCAAATTTTATGAACTGGAG
TTAAATATTCAAGGCCACAAACAGTTAACAGATTGTATCTCAGAATTTTTGAAGGAAGAGAAATTGGAAGGAGACAATCG
ATACTTTTGTGAAAACTGTCAAAGCAAACAGAATGCAACAAGGAAGATCCGGCTTCTTAGCCTGCCCTGTACTCTGAACC
TACAGCTAATGCGCTTTGTCTTTGATCGGCAAACTGGACATAAGAAAAAATTGAATACGTACATTGGCTTCTCAGAAATT
TTGGATATGGAGCCTTATGTGGAACACAAAGGCGGGGCACATGTGTATGAGCTCAGTGCCGTGCTCATCCACAGAGGCGT
GAGCGCCTACTCAGGCCACTACATTGCCCATGTGAAAGACCCGCAGTCAGGTGAATGGTACAAGTTTAATGATGAAGATA
TCGAGAAGATGGAGGGGAAGAAATTGCAACTAGGGATTGAGGAAGATCTAGCAGAACCTTCTAAATCCCAGACACGAAAA
CCCAAGTGCGGCAAAGGATCGCACTGCTCGCGAAACGCGTACATGTTGGTCTACAGACTACAGTCTCGAGAGAAAATCAG
CACGACTGTGCAGGTACCAGCTTTTCTTCAAGAGCTGGTGGACCGAGATAATTCTAAATTTGAAGAGTGGTGTATTGAAA
TGGCCGAGATGCGAAAGCAGAGCGTGGATAAAGGGAAAGCAAAGCACGAAGAGGTTAAGGAGCTGTACCAAAGGTTACCT
GCTGGAGCTGAGCCCTACGAGTTTGTTTCCCTGGAATGGCTCCAAAAGTGGTTGGATGAGTCTACGCCGACCAAGCCAAT
TGATAATCATGCTTGCCTGTGTTCCCACGACAAGCTTCATCCTGATAAAATATCTATTATGAAGAGAATATCTGAGTATG
CAGCTGATATTTTCTACAGTAGATATGGAGGTGGACCAAGACTAACTGTGAAAGCCCTGTGCAAGGAATGTGTAGTAGAG
CGTTGTCGTTTGTTGCGGCTGAAGAACCAACTAAATGAAGATTATAAAACTGTCAATAATCTGTTAAAAACAACAGTAAA
GGGCAATGACGGATTCTGGGTGGGAAAATCCTCCTTGAGGAGTTGGCGCCAACTCGCTCTGGAGCAGCTCGATGAGCAAG
ACAGTGAAGCCGACCAAAACAACGGAAAGATGAACGGTGACTCCTTGGGTAAAGATGAATCAAAGGAAGAAAGAAAAGAA
GAGGAGGAAGAGCTAAATTTTAATGAAGACATTCTGTGTCCGCATGGAGAGTTATGCATATCTGAAAATGAAAGGCGGCT
TGTTTCCCAGGAAGCGTGGAGCAAGCTGCAGCAGTACTTCCCCAAGGCGCCTGAGTTTCCGAGTCACAGAGAGTGCTGCT
CGCAGTGCAAGATTCTAGAAAGAGAAGGGGAAGAAAATGAAGCCTTACATAAGATGATTGCGAATGAGCAAAAAACGTCG
CTACCGAATTTATTCCAGGACAAAAACAGACCATGTCTCAGCAACTGGCCAGAGGATACTGATGTCCTGTACATCGTCTC
ACAGTTCTTTGTAGAAGAATGGAGGAAGTTTGTTAGGAAACCCACGCGCTGCAGCCCCGTGTCAGCCGTGGGGAACAGTG
CTCTCCTGTGTCCCCACGGTGGCCTCATGTTCACTTTCACTTCCATGACCAAAGAAGACTCCAAACTTATAGCTCTCATA
TGGCCCACTGAGTGGCAAATGATTCAAAAGCTCTTCGTCGTTGATCATATAATTAAAATCACCCGGACTACAGTTGGAGA
CATGAATCCTTCAGAGACCCAGTATATTTCTGAGCCTAAACTCTGTCCAGAATGCAGAGAAGGCTTATTGTGTCAGCAAC
AGAGGGACCTCCGCGAATACACTCAAGCCACCATCTATGTCCACAAAGTGGTAGATAATAAAAAGGTCATGAAAGATGCT
GCTCCCGAGTTGAACGTGAGCAGTTCCGAAACAGAGGAGGATAAAGAAGAAACTAAACCAGATGGAGAGAAGGATCCAGA
TTTTAATCAGAGCAATGGCGGAACAAAGCGGCAAAAAATATCCCATCAAAATTACATAGCCTATCAAAAGCAAGTTATTC
GGCGAAGTATGCGACATAGAAAAGTTCGCGGTGAGAAAGCACTTCTTGTTTCTGCTAATCAAACCTTAAAAGAACTGAAA
ATTCAGATCATGCATGCATTTTCAGTTGCTCCCTTTGATCAGAACCTGTCAATCGATGGAAAGATTTTGAGTGATGATTG
TGCCACCCTTGGCACCCTTGGCGTCATTCCGGAGTCTGTCATTTTATTAAAGGCTGATGAGCCAATTGCCGATTATGCTG
CAATGGACGATGTCATGCAAGTGTGTATGCCAGAAGAAGGATTTAAAGGTACTGGCCTACTGGGACATTAA
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sara_636 | 72.39 | 57.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSARG00000008022 retrocopies