Parental gene:

TSPAN13, ENSSTOG00000008833

Aliases:None
Description:tetraspanin 13 [Source:HGNC Symbol;Acc:21643]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393356.1:3282096..3310683(+)


>ENSSTOG00000008833
ATGGTTTGCGGGGGCTTCGCGTGTTCCAAGAACTGCCTGTGCGCCCTCAACCTGCTCTACACCTTGGTTAGTCTGTTGCT
TATTGGAATTGCTGCTTGGGGCATCGGCTTCGGGCTGATTTCCAGTCTCCGAGTGGTTGGTGTGGTCATTGCAGTGGGCA
TCTTCTTGTTTCTGATTGCACTAGTGGGGCTGATCGGAGCTGTGAAACACCATCAGGTGTTGCTATTTTTTTATATGATT
ATTCTTCTTCTTGTATTTATTGTTCAGTTTTCTGTCTCTTGTGCTTGTTTAGCCCTGAACCAGGAGCAACAGAGTCAGCT
TCTGGAGGTTGGTTGGAACAATACAGCAAGTGCTCGAAATGACATCCAGAGAAATTTAAACTGCTGTGGGTTCCGAAGTT
TTAACCCAAATGACACCTGTCTGGCTAGCTGTTTTCAAAGCAGCCACAAGTGCTCGCTTTGTGCTCCAATAATAGGAGAA
TATGCTGGAGAAGTTTTGAGATTTGTGGGTGGCATTGGCCTCTTTTTCAGTTTTACAGAGATCCTGGGGGTTTGGCTGAC
TTACAGATACAGGAACCAGAAAGATCCTCGCGCTAACCCTAGTGCATTCCTTTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010524 ortholog_one2one 1 retrogene
retro_amel_1425,
Choloepus hoffmanni ENSCHOG00000013574 ortholog_one2one 2 retrogenes
retro_chof_1137, retro_chof_861,
Loxodonta africana ENSLAFG00000005956 ortholog_one2one 3 retrogenes
retro_lafr_1088, retro_lafr_195, retro_lafr_556,
Ictidomys tridecemlineatus ENSSTOG00000001138 within_species_paralog 1 retrogene
retro_itri_1256,
Tursiops truncatus ENSTTRG00000009870 ortholog_one2one 1 retrogene
retro_ttru_551,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1367 70.33 86.27
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Download FASTA sequences of all ENSSTOG00000008833 retrocopies