Parental gene: | PTGS2, ENSSTOG00000009613 |
| Aliases: | None |
| Description: | prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) [Source:HGNC Symbol;Acc:9605] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393291.1:3822253..3828043(+) |
>ENSSTOG00000009613
ATGCTCCGGGCCGCTCTGCTGCTCAGCGCCGCCTTGGCCATCAGCCGCGCAGCAAATCCTTGCTGTTCCAACCCATGTCA
AAACCAAGGTGTATGTATGAGCACAGGATTTGACCAGTATAAGTGTGACTGTACCAGGACGGGATTTTACGGTGAAAATT
GTTCAACACCTGAACTTTTGACCAGAATAAAACTACTTCTGAAGCCCACTCCAAACACAGTCCACTACATACTTACCCAC
TTCAAGGGGGTCTGGAACATTGTCAATAATATTCCCTTCCTGCGAAATTCAATCATGAGATATGTGCTGACTTCCAGATC
ACATTTGATTGACAGTCCACCAACTTACAATGTGCACTATGGCTACAAAAACTGGGAAGCCTTCTCTAACCTCTCCTACT
ATACCAGAGCCCTTCCTCCTGTGGCAGATGACTGCCCAACACCCATGGGTGTGAAAGGGAAGAAGGAGCTTCCTGATTCT
AAAGAGGTGTTTGAAAAAGTTCTTCTAAGAAGAAAGTTCATTCCTGACCCCCAAGGCACCAATATGATGTTTGCATTCTT
TGCTCAGCACTTCACCCATCAATTTTTTAAGTCAGACCGGAATCGAGGGCCAGCTTTCACCACAGGACTGGGCCACGGGG
TGGACCTAAGTCATGTTTATGGTGAAACTCTGGATAGACAACATAAGCTGCGCCTCTTCAAGGATGGAAAACTGAAATAT
CAGGTGATTGATGGAGAGGTGTATCCTCCCACAGTCAAAGACACTCAAGTGGAGATGCTCTACCCCCCTCATGTCCCTGA
ACACCTTCAGTTTGCTGTGGGGCAGGAGGTCTTTGGTCTAGTGCCTGGTCTGATGATGTATGCCACAATTTGGCTACGGG
AACATAATCGAGTATGCGATGTGCTTAAACAGGAACATCCAGAGTGGGATGATGAGCGGTTGTTCCAGACGACCAGACTA
ATATTAATAGGGGAGACCATTAAAATTGTGATTGAAGACTATGTCCAGCACTTGAGTGGCTATCACTTCAAACTGAAGTT
TGACCCAGAGCTGCTTTTCAACCAACAATTCCAGTACCAAAACCGTATTGCTTCTGAGTTTAACACACTTTATCACTGGC
ATCCCCTTCTGCCTGACACCTTTCAAATTCATGACCAGGAGTACAACTATCAACAGTTTATCTACAACAACTCCATTTTA
CTGGAACATGGACTTACCCAGTTTGTTGAGTCATTCAGCAGACAAATTGCTGGCAGGGTTTCTGGTGGCAGGAATGTGCC
ATCTGCAGTACAAGCAGTGGCCAAGGCCTCAATTGACCACAGCAGAAATATGAAATACCAGTCTTTCAACGAGTACCGCA
AACGCTTCAACCTGAAGCCCTACAAATCATTTGAAGAACTTACAGGAGAGAAGGAAATGGCCGCAGAGTTGGAAGCTCTC
TATGGTGACATTGATGCCGTGGAGTTCTATCCTGCCCTCCTGGTGGAAAAGCCTCGTCCTGATGCCATCTTTGGTGAGAC
CATGGTGGAAATGGGCGCACCATTCTCCTTGAAAGGACTTTTGGGTAATCCTATATGTTCTCCTCACTATTGGAAGCCAA
GCACTTTTGGAGGAGAAGTGGGCTTTAAGATCATCAACACTGCCTCTATTCAGTCCCTCATCTGCCGTAACGTGAAGGGC
TGTCCCTTCGTCTCATTCAGTGTTCAGGATCCACTGCTCACCAAGACAGTCACCATCAATGCAAGTGCTTCTCACTCCAG
ACTAGAAGACATCAATCCCACAGTACTACTGAAAGGGCGTGCAACAGAACTGTAG
ATGCTCCGGGCCGCTCTGCTGCTCAGCGCCGCCTTGGCCATCAGCCGCGCAGCAAATCCTTGCTGTTCCAACCCATGTCA
AAACCAAGGTGTATGTATGAGCACAGGATTTGACCAGTATAAGTGTGACTGTACCAGGACGGGATTTTACGGTGAAAATT
GTTCAACACCTGAACTTTTGACCAGAATAAAACTACTTCTGAAGCCCACTCCAAACACAGTCCACTACATACTTACCCAC
TTCAAGGGGGTCTGGAACATTGTCAATAATATTCCCTTCCTGCGAAATTCAATCATGAGATATGTGCTGACTTCCAGATC
ACATTTGATTGACAGTCCACCAACTTACAATGTGCACTATGGCTACAAAAACTGGGAAGCCTTCTCTAACCTCTCCTACT
ATACCAGAGCCCTTCCTCCTGTGGCAGATGACTGCCCAACACCCATGGGTGTGAAAGGGAAGAAGGAGCTTCCTGATTCT
AAAGAGGTGTTTGAAAAAGTTCTTCTAAGAAGAAAGTTCATTCCTGACCCCCAAGGCACCAATATGATGTTTGCATTCTT
TGCTCAGCACTTCACCCATCAATTTTTTAAGTCAGACCGGAATCGAGGGCCAGCTTTCACCACAGGACTGGGCCACGGGG
TGGACCTAAGTCATGTTTATGGTGAAACTCTGGATAGACAACATAAGCTGCGCCTCTTCAAGGATGGAAAACTGAAATAT
CAGGTGATTGATGGAGAGGTGTATCCTCCCACAGTCAAAGACACTCAAGTGGAGATGCTCTACCCCCCTCATGTCCCTGA
ACACCTTCAGTTTGCTGTGGGGCAGGAGGTCTTTGGTCTAGTGCCTGGTCTGATGATGTATGCCACAATTTGGCTACGGG
AACATAATCGAGTATGCGATGTGCTTAAACAGGAACATCCAGAGTGGGATGATGAGCGGTTGTTCCAGACGACCAGACTA
ATATTAATAGGGGAGACCATTAAAATTGTGATTGAAGACTATGTCCAGCACTTGAGTGGCTATCACTTCAAACTGAAGTT
TGACCCAGAGCTGCTTTTCAACCAACAATTCCAGTACCAAAACCGTATTGCTTCTGAGTTTAACACACTTTATCACTGGC
ATCCCCTTCTGCCTGACACCTTTCAAATTCATGACCAGGAGTACAACTATCAACAGTTTATCTACAACAACTCCATTTTA
CTGGAACATGGACTTACCCAGTTTGTTGAGTCATTCAGCAGACAAATTGCTGGCAGGGTTTCTGGTGGCAGGAATGTGCC
ATCTGCAGTACAAGCAGTGGCCAAGGCCTCAATTGACCACAGCAGAAATATGAAATACCAGTCTTTCAACGAGTACCGCA
AACGCTTCAACCTGAAGCCCTACAAATCATTTGAAGAACTTACAGGAGAGAAGGAAATGGCCGCAGAGTTGGAAGCTCTC
TATGGTGACATTGATGCCGTGGAGTTCTATCCTGCCCTCCTGGTGGAAAAGCCTCGTCCTGATGCCATCTTTGGTGAGAC
CATGGTGGAAATGGGCGCACCATTCTCCTTGAAAGGACTTTTGGGTAATCCTATATGTTCTCCTCACTATTGGAAGCCAA
GCACTTTTGGAGGAGAAGTGGGCTTTAAGATCATCAACACTGCCTCTATTCAGTCCCTCATCTGCCGTAACGTGAAGGGC
TGTCCCTTCGTCTCATTCAGTGTTCAGGATCCACTGCTCACCAAGACAGTCACCATCAATGCAAGTGCTTCTCACTCCAG
ACTAGAAGACATCAATCCCACAGTACTACTGAAAGGGCGTGCAACAGAACTGTAG
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1417 | 89.13 | 60.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1651 | 91.06 | 86.92 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000009613 retrocopies