Parental gene: | TRAF7, ENSSTOG00000013083 |
| Aliases: | None |
| Description: | TNF receptor-associated factor 7, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:20456] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393504.1:1868665..1879373(-) |
>ENSSTOG00000013083
ATGAGCTCAGGCAAGAGCGCCCGCTACAACCGCTTCTCTGGGGGTCCTGCCAACCTTCCTTCCCCAGACCTCAGCACTGG
GACCAGAATGGAAACAACCTTTGGACCCGCCTTCTCGGCAGTCACCACCATCACAAAAGCCGATGGGACCAGTACTTACA
AGCAGCACCGCAGAACACCTTCCTCTTCCAGCACCCTCGCCTACTCCCCACGGGATGAGGAGGACACCATGCCCCCCATC
AGCACCCCTCGTCGCTCTGACTCGGCCATCTCCGTCCGCTCCCTGCATTCTGAGTCCAGCATGTCCTTGCGCTCCACGTT
CTCACTGCCTGAGGAAGAAGAGGAGCCGGAGCCACTGGTATTTGCTGAGCAGCCCTCGGTGAAGTTGTGCTGCCAACTCT
GCTGTGGTGTATTCAAGGATCCTGTGATCACCACCTGTGGGCACACGTTCTGTAGAAGATGCGCCTTGAAATCAGAGAAG
TGTCCTGTGGACAATGCCAAGCTGACAGTGGTGGTGAACAACATCGCAGTGGCCGAACAAATTGGGGAGCTCTTCATCCA
CTGCAGGCACGGCTGCCGTGTGGTGGGTGCAGGGAAGCCCAGTGTCTTCGAGGTGGACCCTCGGGGGTGCCCCTTCACCA
TCAAGCTTAGTGCCCGAAAGGATCACGAGGGCAGCTGTGACTACAGGCCTGTGCGCTGCCCCAACAATCCTAGCTGCCCA
CCCCTCCTCAAGATGAACCTGGAAGCCCACCTCAAAGAATGCGAGCACATCAAGTGTCCTCACTCCAAGTACGGGTGCAC
CTTCATCGGGAACCAGGACACATATGAGACACATCTAGAGACATGCAGGTTTGAGGGCCTGAAGGAGTTCTTGCAGCAGA
CAGATGACCGCTTCCATGAGATGCATGTGGCCTTGGCACAAAAGGACCAGGAGATAGCCTTCCTGCGCTCCATGCTGGGC
AAGCTCTCTGAGAAGATTGACCAGCTAGAGAAGAGCCTCGAGCTCAAGTTTGATGTCCTGGATGAAAATCAGAGCAAACT
CAGCGAGGACCTCATGGAGTTCCGGAGGGATGCATCCATGTTGAATGATGAGCTGTCCCACATCAACGCAAGGCTGAACA
TGGGCATCCTAGGATCCTACGACCCTCAGCAGATCTTCAAGTGCAAAGGGACCTTTGTAGGCCACCAGGGCCCTGTCTGG
TGTCTCTGTGTCTACTCCATGGGTGACCTGCTCTTCAGTGGTTCCTCTGACAAGACCATCAAGGTATGGGACACCTGTAC
CACCTACAAATGCCAGAAGACACTGGAGGGCCATGACGGCATTGTGCTAGCTCTCTGCATCCAGGGGTGCAAGCTCTATA
GTGGCTCTGCAGATTGCACTATCATTGTGTGGGACATCCAGAACCTGCAGAAGGTGAACACCATCCGGGCCCATGACAAC
CCTGTGTGCACACTTGTGTCCTCTCACAACATGCTCTTCAGTGGCTCCCTGAAGGCCATTAAGGTCTGGGACATCGTGGG
TACTGAACTAAAGTTGAAGAAGGAACTCACAGGCCTCAACCACTGGGTGCGGGCCCTGGTGGCAGCCCAGAGCTACTTGT
ACAGTGGCTCCTACCAGACAATCAAGATCTGGGACATCCGGACCCTCGACTGCATCCACGTCCTACAGACATCTGGTGGC
AGTGTCTACTCCATCGCTGTGACGAATCACCACATTGTCTGTGGCACCTATGAGAACCTCATCCATGTATGGGACATCGA
GTCCAAGGAGCAGGTGCGGACCCTAACAGGCCATGTGGGAACCGTCTATGCCTTGGCAGTCATCTCGACACCAGACCAGA
CCAAAGTCTTCAGTGCGTCCTACGACCGGTCCCTCAGGGTCTGGAGTATGGATAACATGATCTGCACCCAGACCCTACTG
CGCCACCAGGGTAGTGTGACTGCATTGGCTGTGTCCCGGGGCCGGCTCTTCTCAGGAGCTGTGGATAGCACTGTGAAGGT
TTGGACATGCTAA
ATGAGCTCAGGCAAGAGCGCCCGCTACAACCGCTTCTCTGGGGGTCCTGCCAACCTTCCTTCCCCAGACCTCAGCACTGG
GACCAGAATGGAAACAACCTTTGGACCCGCCTTCTCGGCAGTCACCACCATCACAAAAGCCGATGGGACCAGTACTTACA
AGCAGCACCGCAGAACACCTTCCTCTTCCAGCACCCTCGCCTACTCCCCACGGGATGAGGAGGACACCATGCCCCCCATC
AGCACCCCTCGTCGCTCTGACTCGGCCATCTCCGTCCGCTCCCTGCATTCTGAGTCCAGCATGTCCTTGCGCTCCACGTT
CTCACTGCCTGAGGAAGAAGAGGAGCCGGAGCCACTGGTATTTGCTGAGCAGCCCTCGGTGAAGTTGTGCTGCCAACTCT
GCTGTGGTGTATTCAAGGATCCTGTGATCACCACCTGTGGGCACACGTTCTGTAGAAGATGCGCCTTGAAATCAGAGAAG
TGTCCTGTGGACAATGCCAAGCTGACAGTGGTGGTGAACAACATCGCAGTGGCCGAACAAATTGGGGAGCTCTTCATCCA
CTGCAGGCACGGCTGCCGTGTGGTGGGTGCAGGGAAGCCCAGTGTCTTCGAGGTGGACCCTCGGGGGTGCCCCTTCACCA
TCAAGCTTAGTGCCCGAAAGGATCACGAGGGCAGCTGTGACTACAGGCCTGTGCGCTGCCCCAACAATCCTAGCTGCCCA
CCCCTCCTCAAGATGAACCTGGAAGCCCACCTCAAAGAATGCGAGCACATCAAGTGTCCTCACTCCAAGTACGGGTGCAC
CTTCATCGGGAACCAGGACACATATGAGACACATCTAGAGACATGCAGGTTTGAGGGCCTGAAGGAGTTCTTGCAGCAGA
CAGATGACCGCTTCCATGAGATGCATGTGGCCTTGGCACAAAAGGACCAGGAGATAGCCTTCCTGCGCTCCATGCTGGGC
AAGCTCTCTGAGAAGATTGACCAGCTAGAGAAGAGCCTCGAGCTCAAGTTTGATGTCCTGGATGAAAATCAGAGCAAACT
CAGCGAGGACCTCATGGAGTTCCGGAGGGATGCATCCATGTTGAATGATGAGCTGTCCCACATCAACGCAAGGCTGAACA
TGGGCATCCTAGGATCCTACGACCCTCAGCAGATCTTCAAGTGCAAAGGGACCTTTGTAGGCCACCAGGGCCCTGTCTGG
TGTCTCTGTGTCTACTCCATGGGTGACCTGCTCTTCAGTGGTTCCTCTGACAAGACCATCAAGGTATGGGACACCTGTAC
CACCTACAAATGCCAGAAGACACTGGAGGGCCATGACGGCATTGTGCTAGCTCTCTGCATCCAGGGGTGCAAGCTCTATA
GTGGCTCTGCAGATTGCACTATCATTGTGTGGGACATCCAGAACCTGCAGAAGGTGAACACCATCCGGGCCCATGACAAC
CCTGTGTGCACACTTGTGTCCTCTCACAACATGCTCTTCAGTGGCTCCCTGAAGGCCATTAAGGTCTGGGACATCGTGGG
TACTGAACTAAAGTTGAAGAAGGAACTCACAGGCCTCAACCACTGGGTGCGGGCCCTGGTGGCAGCCCAGAGCTACTTGT
ACAGTGGCTCCTACCAGACAATCAAGATCTGGGACATCCGGACCCTCGACTGCATCCACGTCCTACAGACATCTGGTGGC
AGTGTCTACTCCATCGCTGTGACGAATCACCACATTGTCTGTGGCACCTATGAGAACCTCATCCATGTATGGGACATCGA
GTCCAAGGAGCAGGTGCGGACCCTAACAGGCCATGTGGGAACCGTCTATGCCTTGGCAGTCATCTCGACACCAGACCAGA
CCAAAGTCTTCAGTGCGTCCTACGACCGGTCCCTCAGGGTCTGGAGTATGGATAACATGATCTGCACCCAGACCCTACTG
CGCCACCAGGGTAGTGTGACTGCATTGGCTGTGTCCCGGGGCCGGCTCTTCTCAGGAGCTGTGGATAGCACTGTGAAGGT
TTGGACATGCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Tursiops truncatus | ENSTTRG00000008169 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1441 | 90.46 | 96.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000013083 retrocopies