Parental gene: | HIF1A, ENSTBEG00000011941 |
| Aliases: | None |
| Description: | hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) [Source:HGNC Symbol;Acc:4910] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_844:15074..46907(+) |
>ENSTBEG00000011941
ATAAGTTCTGAACGTCGAAAAGAAAAATCCAGAGATGCAGCCAGATCTCGGCGAAGTAAAGAGTCCGAAGTTTTTTATGA
GCTTGCTCATCAGTTGCCACTTCCCCATAATGTGAGTTCTCATCTTGATAAGGCTTCTGTTATGAGGCTTACCATCAGCT
ATTTGCGTGTGAGGAAACTCCTGGATGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGACCTGTGAAAAAGGGTAAAGAGCAAAACACACAGCGAAGCTTTTTTCTCAGAATGAAA
TGTACTCTAACTAGCAGGGGGAGAACTATGAACATAAAGTCTGCAACATGGAAGGTACTTCACTGCACAGGCCATATTCA
TGTGTATGATACCAACAGTAGCCAATCTCAGTGTGGATATAAGAAACCACCCATGACNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAATTACTGAATTGATGGGATATGAGCCAGAAGAACTTTTGGGCCGCTCAATTTATGAATATTA
CCATGCTCTGGATTCTGATCATCTGACCAAAACTCATCATGATATGTTTACTAAAGGACAAGTCACCACAGGACAGTACA
GGATGCTTGCCAAGAGAGGTGGATATGTCTGGGTTGAAACTCAAGCAACTGTCATATATAACACTAAGAACTCTCAACCG
CAATGCATCGTGTGTGTAAATTACGTTGTAAGTGGTATTATTCAGCACGACTTGATTTTCTCCCTTCAACAAACAGAATG
TGTCCTCAAACCAGTTGAATCTTCAGATATGAAAATGACTCAGCTATTCACCAAAGTTGAATCAGAAGACACAAGTAGCC
TTTTTGATAAACTTAAGAAGGAACCTGATGCTTTAACTTTGCTGGCCCCAGCTGCTGGAGACACAATCATATCTTTAGAT
TTTGGCAGCAATGACACAGAAACTGATGACCAGCAACTTGAGGAAGTTCCATTGTATAACGATGTAATGCTCCCTTCATC
CGATGAAAAGTTACAAAACATAAATTTGGCAATGTCTCCATTACCTGCATCTGAAACTCCAAAGCCACTTCGAAGTAGTG
CTGACCCTGCACTCAATCAAGAAGTTGCATTAAAATTAGAACCAAATCCAGAGTCATTGGAACTTTCTTTTACTATGCCC
CAGATTCAAGATCAGCCAGCCAGTCCTTCTGATGGAAGCACTAGGCAAAGTTCACCTGAGCCTAACAGTCCCAGTGAATA
TTGTTTTTATGTGGACAGTGATATGGTCAATGAATTCAAGTTGGAATTGGTAGAAAAACTTTTTGCTGAAGACACAGAAG
CAAAAAATCCATTTTCCACTCAGGACACTGACTTAGACCTGGAGATGTTAGCCCCCTATATCCCAATGGATGATGACTTC
CAATTACGCTCCTTTGATCAACTGTCGACATTAGAAAGTAGCTCTTCAAGCCCTCAAAGCGTGAGCAGCACAATTCCAGT
ATTTCAGCAGACTCAAATGCAAGAACCTGCTATTAACACTACCAAGACCACTGCAACTCCTGATGAATTAAAAACAGTGA
CCAAAGATGGTATGGAAGATGTTAAAATACTGGTTGCATCTCCGTCTCCTACTCACATACCTAAAGAAACTACTAGTGCC
ACAACATCACCATATAAAGATACTCAGAGTCGGACAGCCTCACCAAACAGAGCAGGAAAAGGAGTCATAGAACAGACAGA
AAAATCTCATCCAAGAAGCCCTAACGTGTTATCTGTCACTTTGAGTCAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTAGCATGTAGACTGCTGGGGCAATCAATGG
ATGAGAGCGGATTACCACAGCTGACCAGTTATGATTGTGAAGTTAATGCTCCTATACAAGGCAGCAGAAACCTACTGCAG
GGTGAAGAATTACTCAGAGCTTTGGATCAAGTTAACTGA
ATAAGTTCTGAACGTCGAAAAGAAAAATCCAGAGATGCAGCCAGATCTCGGCGAAGTAAAGAGTCCGAAGTTTTTTATGA
GCTTGCTCATCAGTTGCCACTTCCCCATAATGTGAGTTCTCATCTTGATAAGGCTTCTGTTATGAGGCTTACCATCAGCT
ATTTGCGTGTGAGGAAACTCCTGGATGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGACCTGTGAAAAAGGGTAAAGAGCAAAACACACAGCGAAGCTTTTTTCTCAGAATGAAA
TGTACTCTAACTAGCAGGGGGAGAACTATGAACATAAAGTCTGCAACATGGAAGGTACTTCACTGCACAGGCCATATTCA
TGTGTATGATACCAACAGTAGCCAATCTCAGTGTGGATATAAGAAACCACCCATGACNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAATTACTGAATTGATGGGATATGAGCCAGAAGAACTTTTGGGCCGCTCAATTTATGAATATTA
CCATGCTCTGGATTCTGATCATCTGACCAAAACTCATCATGATATGTTTACTAAAGGACAAGTCACCACAGGACAGTACA
GGATGCTTGCCAAGAGAGGTGGATATGTCTGGGTTGAAACTCAAGCAACTGTCATATATAACACTAAGAACTCTCAACCG
CAATGCATCGTGTGTGTAAATTACGTTGTAAGTGGTATTATTCAGCACGACTTGATTTTCTCCCTTCAACAAACAGAATG
TGTCCTCAAACCAGTTGAATCTTCAGATATGAAAATGACTCAGCTATTCACCAAAGTTGAATCAGAAGACACAAGTAGCC
TTTTTGATAAACTTAAGAAGGAACCTGATGCTTTAACTTTGCTGGCCCCAGCTGCTGGAGACACAATCATATCTTTAGAT
TTTGGCAGCAATGACACAGAAACTGATGACCAGCAACTTGAGGAAGTTCCATTGTATAACGATGTAATGCTCCCTTCATC
CGATGAAAAGTTACAAAACATAAATTTGGCAATGTCTCCATTACCTGCATCTGAAACTCCAAAGCCACTTCGAAGTAGTG
CTGACCCTGCACTCAATCAAGAAGTTGCATTAAAATTAGAACCAAATCCAGAGTCATTGGAACTTTCTTTTACTATGCCC
CAGATTCAAGATCAGCCAGCCAGTCCTTCTGATGGAAGCACTAGGCAAAGTTCACCTGAGCCTAACAGTCCCAGTGAATA
TTGTTTTTATGTGGACAGTGATATGGTCAATGAATTCAAGTTGGAATTGGTAGAAAAACTTTTTGCTGAAGACACAGAAG
CAAAAAATCCATTTTCCACTCAGGACACTGACTTAGACCTGGAGATGTTAGCCCCCTATATCCCAATGGATGATGACTTC
CAATTACGCTCCTTTGATCAACTGTCGACATTAGAAAGTAGCTCTTCAAGCCCTCAAAGCGTGAGCAGCACAATTCCAGT
ATTTCAGCAGACTCAAATGCAAGAACCTGCTATTAACACTACCAAGACCACTGCAACTCCTGATGAATTAAAAACAGTGA
CCAAAGATGGTATGGAAGATGTTAAAATACTGGTTGCATCTCCGTCTCCTACTCACATACCTAAAGAAACTACTAGTGCC
ACAACATCACCATATAAAGATACTCAGAGTCGGACAGCCTCACCAAACAGAGCAGGAAAAGGAGTCATAGAACAGACAGA
AAAATCTCATCCAAGAAGCCCTAACGTGTTATCTGTCACTTTGAGTCAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTAGCATGTAGACTGCTGGGGCAATCAATGG
ATGAGAGCGGATTACCACAGCTGACCAGTTATGATTGTGAAGTTAATGCTCCTATACAAGGCAGCAGAAACCTACTGCAG
GGTGAAGAATTACTCAGAGCTTTGGATCAAGTTAACTGA
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_4316 | 92.73 | 53.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000011941 retrocopies