Parental gene: | fem1c, ENSTNIG00000003195 |
| Aliases: | None |
| Description: | fem-1 homolog c (C.elegans) [Source:ZFIN;Acc:ZDB-GENE-031008-3] |
| Organism: | Tetraodon (Tetraodon nigroviridis) |
| Coordinates: | 12:7790071..7793414(+) |
>ENSTNIG00000003195
ATGGATTTAAAGACCGCCGTTTTTAACGCTGCCAGGGACGGCAAGCTCCGTCTGCTCCAGAAACTACTGGAAAACAAAGA
TGGACACGAAGTGACCAAGTTAATGGGCGAGAAGACCAACGGTGCCACGCCGCTTCTAATGGCCTCCCGGAACGGCCACC
TGGACCTGGTGGAGTACCTGTTGGAGTGCTGCAGCGCGCCCATTGAGGTCGGTGGGTCGGTCAACTTTGACGGGGAGACC
ATTGAAGGAGCCCCGCCGCTTTGGGCCGCCTCTGCGGCCGGACACCTGAAAGTGGTCCAGTCCCTGCTGGGTCACGGAGC
CTCGGTCAACAGCACCACCTTGACCAACTCCACCCCGCTGAGGGCGGCTTGCTTTGACGGTCACTTGGACATTGTGAAAT
ACCTGGTGGAACACAAAGCCGACCTGGAGGTGGCCAACAGACACGGCCACACGTGTCTGATGATTTCCTGCTACAAGGGA
CACAAGGACATAGCCCAGTTTCTGCTGCAGAATGGTGCCGATGTCAACAGAAAAAGCGTGAAAGGCAACACAGCCCTCCA
TGACTGTGCAGAGTCAGGAAGCCTGGAGATCATGCAGATGTTACTGCAGTACGGAGCCTCCATGGAGCAAGACGGCTACG
GCATGACACCCCTGCTCTCCGCCAGCGTCACGGGCCACACCAACATCGTAGAATACCTAACCATGCACGAGCAGACAAGA
CACACCGCTCGCATCGATGCCCTGGAGCTCTTAGGAGCCACCTTTGTGGACAAAAAGCGAGATCTCCTCGGAGCTTTAAA
GTACTGGAAAAGAGCCATGGACCTCAGGTATATGGACAGTAACAACGTTGTCCACAAACCAGAACCCAAGCAGCTGATCA
TGGCGTACGACTACGCCAAGGAGGTGACGAATGGAGAAGAGCTGGACGGGCTGATATCCGACCCCGATGAAATGCGCATG
CAGGCGCTGCTCATTCGTGAGAGGATCCTCGGCCCCCAACACCCAGACACGTCTTACTATATCCGCTACCGAGGGGCCGT
CTACGCAGACTCTGGCAACTTTGAGCGCTGCATTAATCTCTGGAAGTATGCTTTGGACATGCAGCAGAGCAACCTGGACC
CCCTCAGCCCCATGACGGCCTCCAGCCTGCTCTCGTTCGCCGAGCTCTTCTCCTTCATGCTGCAGGACAGGGCCAAGGGC
CTCTTGGGGACATCCATTTCATTTGAGGATTTGATGGGGATCCTTTCAAAGGGCGTTTTGGAAATCGAGCGGGCGGTTAA
ACATAGTGGACCCACAGCTCTGGACCCGGCCCAGCTCAGCAAGGCCCTGTCGATCATCCTGCACCTCATTTGTCTTTTGG
AGAAAGTGCCATGTACTGCAGAGCAGGACCACTTCAAGAAGGAAACTATATATAGATTTTTGAAACTACAGCCATGTGGT
AAAAACGGCTACAGCCCTCTACACCTGGCCGTCGACCGCAACACCACATGTGTGGGCCGCTACCCCGTCTGCAAGTTCCC
CTCGCTCACAGTCGCTTCCATCCTGCTGGAATGCGGGGCCGACGTCAACAGCCGTGACAACGACGACAACAGTCCTCTTC
ACATCGCCGCGTCCAACGGTCACCCAGACATAATGAACTTGCTGATTTCAAGCGGGAGTCATTTTGACAGCACCAACGCG
TTCCAGCAAACGCCCTGTGACCTCCTGGATGCCAAGGAGCTGTCCAGGAACGTCATCCAGCCCATCAACCACACCACCCT
GCAGTGCCTAGCTGCCAGGACCATAATCAAGCACAGCCTTAGCTACCAGGGAAACATCCCAGAGAAACTGGAGGCCTTCA
TCTTGCTGCACAGATAG
ATGGATTTAAAGACCGCCGTTTTTAACGCTGCCAGGGACGGCAAGCTCCGTCTGCTCCAGAAACTACTGGAAAACAAAGA
TGGACACGAAGTGACCAAGTTAATGGGCGAGAAGACCAACGGTGCCACGCCGCTTCTAATGGCCTCCCGGAACGGCCACC
TGGACCTGGTGGAGTACCTGTTGGAGTGCTGCAGCGCGCCCATTGAGGTCGGTGGGTCGGTCAACTTTGACGGGGAGACC
ATTGAAGGAGCCCCGCCGCTTTGGGCCGCCTCTGCGGCCGGACACCTGAAAGTGGTCCAGTCCCTGCTGGGTCACGGAGC
CTCGGTCAACAGCACCACCTTGACCAACTCCACCCCGCTGAGGGCGGCTTGCTTTGACGGTCACTTGGACATTGTGAAAT
ACCTGGTGGAACACAAAGCCGACCTGGAGGTGGCCAACAGACACGGCCACACGTGTCTGATGATTTCCTGCTACAAGGGA
CACAAGGACATAGCCCAGTTTCTGCTGCAGAATGGTGCCGATGTCAACAGAAAAAGCGTGAAAGGCAACACAGCCCTCCA
TGACTGTGCAGAGTCAGGAAGCCTGGAGATCATGCAGATGTTACTGCAGTACGGAGCCTCCATGGAGCAAGACGGCTACG
GCATGACACCCCTGCTCTCCGCCAGCGTCACGGGCCACACCAACATCGTAGAATACCTAACCATGCACGAGCAGACAAGA
CACACCGCTCGCATCGATGCCCTGGAGCTCTTAGGAGCCACCTTTGTGGACAAAAAGCGAGATCTCCTCGGAGCTTTAAA
GTACTGGAAAAGAGCCATGGACCTCAGGTATATGGACAGTAACAACGTTGTCCACAAACCAGAACCCAAGCAGCTGATCA
TGGCGTACGACTACGCCAAGGAGGTGACGAATGGAGAAGAGCTGGACGGGCTGATATCCGACCCCGATGAAATGCGCATG
CAGGCGCTGCTCATTCGTGAGAGGATCCTCGGCCCCCAACACCCAGACACGTCTTACTATATCCGCTACCGAGGGGCCGT
CTACGCAGACTCTGGCAACTTTGAGCGCTGCATTAATCTCTGGAAGTATGCTTTGGACATGCAGCAGAGCAACCTGGACC
CCCTCAGCCCCATGACGGCCTCCAGCCTGCTCTCGTTCGCCGAGCTCTTCTCCTTCATGCTGCAGGACAGGGCCAAGGGC
CTCTTGGGGACATCCATTTCATTTGAGGATTTGATGGGGATCCTTTCAAAGGGCGTTTTGGAAATCGAGCGGGCGGTTAA
ACATAGTGGACCCACAGCTCTGGACCCGGCCCAGCTCAGCAAGGCCCTGTCGATCATCCTGCACCTCATTTGTCTTTTGG
AGAAAGTGCCATGTACTGCAGAGCAGGACCACTTCAAGAAGGAAACTATATATAGATTTTTGAAACTACAGCCATGTGGT
AAAAACGGCTACAGCCCTCTACACCTGGCCGTCGACCGCAACACCACATGTGTGGGCCGCTACCCCGTCTGCAAGTTCCC
CTCGCTCACAGTCGCTTCCATCCTGCTGGAATGCGGGGCCGACGTCAACAGCCGTGACAACGACGACAACAGTCCTCTTC
ACATCGCCGCGTCCAACGGTCACCCAGACATAATGAACTTGCTGATTTCAAGCGGGAGTCATTTTGACAGCACCAACGCG
TTCCAGCAAACGCCCTGTGACCTCCTGGATGCCAAGGAGCTGTCCAGGAACGTCATCCAGCCCATCAACCACACCACCCT
GCAGTGCCTAGCTGCCAGGACCATAATCAAGCACAGCCTTAGCTACCAGGGAAACATCCCAGAGAAACTGGAGGCCTTCA
TCTTGCTGCACAGATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gasterosteus aculeatus | ENSGACG00000007406 | ortholog_one2one | 1 retrogene | |
| Gadus morhua | ENSGMOG00000005806 | ortholog_one2one | 1 retrogene | |
| Oreochromis niloticus | ENSONIG00000015041 | ortholog_one2one | 1 retrogene | |
| Oryzias latipes | ENSORLG00000004946 | ortholog_one2one | 1 retrogene | |
| Takifugu rubripes | ENSTRUG00000012022 | ortholog_one2one | 1 retrogene | |
| Xiphophorus maculatus | ENSXMAG00000015297 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tnig_27 | 68.87 | 99.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTNIG00000003195 retrocopies