Parental gene:

sfpq, ENSTNIG00000011331

Aliases:None
Description:splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
Organism:Tetraodon (Tetraodon nigroviridis)
Coordinates:Un_random:12911277..12917244(-)


>ENSTNIG00000011331
CAACCGAATCAGGGACCACCGCAGACTCCACCGAAGCAGCAACAGAACCAGCCTATTCTCCCTCCGCCAAGTCCCGGCCC
CGCACTAACAATGAAAGGCCCGATGGAGCAGCAGAAAACGACGGAAAAAGAACAGGGACCGATTAAACAGCCAACTCCTG
CACCTCCATCTACCATTCAGTCACCTCCGTCAAAGACCAACATCACGCCTCCTCAACATCCGGAAAACAAAACCCAAGGA
AATGCAAATGGTCAACAACAAAAGCAGCCTCCGCAAGCTAGCCCCAAGTCAGCCCCGCAGCAGTGCCAACGACCGGGCCT
GCAGCAGGGCCAGCGATCCGGCCCGCCGCAGGGCCAGCGCCCGGGCCCGCAGCAGGGCCAGCGTCCGGGTCCGCAGCAGG
GCCAGCGATCAGGACCGCAACAGGGCCAGAGATTAGGACCACAACAGAACCAGAGATCGGGACAACAGCAAGTACATAAA
GCTACTCCAATAACAATAAAACGGGAAGACGGACAGGAGTTTAAAGCAACACTGTCCATGCTGCTCAAGCCGGGTGAGAA
GAGATACACTCAGCGATGCCGTCTTTTTATTGGTAACCTCCCAAACGATATAACGGAAGATGCATTTAAGAAGCTTTTTG
CAAAATACGGGGAACCTAGTGAAGTGTTCATCAACAAAGGCAAAGGCTTTGGTTTCATCCGTCTGGAGTCCCGGGCGCTT
GCGGAGATTGCAAAGGCAGAGTTGGATGACACCCCAATGAAAGGCAGACCACTTCGAGTGCGATTTGCCACACACTCGGC
AGCCCTCTCTGTGAAGAACCTGTCTCCATTTGTTTCCAATGAGCTCCTCGAAGAGGCCTTTTCTCAGTTTGGAATGGTTG
AAAGAGCAGTTGTCATTGTGGATGATCGTGGACGTTCCACGGGGAAGGGCATTGTTGAGTTTGCCTCCAAGCCCGCTGCC
AGAAAGGCCCTTGATCGGTGCAACGAAGGCGTTTTCCTTCTTACTTCTTCCCCACGGCCTGTTGTTGTAGAGCCTTTGGA
ACAATTTGATGATGAGGATGGGCTCCCAGAGAAGCTGGCACAGAAAAATCCCCGATACCAGGCAGAGCGTGAGGAACCTC
CCCGCTTTGCTCGCCCAGGAACTTTTGAATTTGAGTATGCTAAGCGCTGGAAGTCGCTGGATGAGATGGAGAAGCAACAA
AGGCAACAGGTGGAAAAAAACATGCAGGAAGCTCGCGAGAAGCTGGAAGCAGAAATGGAGGACGCCTTTCACGAGCACCA
AGCCAATCTGCTTAGACAAGACCTTCTAAGGCGACAGGAGGAATTGCGGCGTATGGAAGAACTGCACAGCCAGGAAATGC
AGAAGAGAAAAGAGATGCAGCTAAGGCAAGAAGAAGAGCGTCGGCGACGCGAAGAAGAAATGCTTCGGAAACGAGAAATG
GAAGAGCAGATGCGTCGCCAGCGTGAGGAGAACTACAGGATGGGAGGATTTATGGACGTGAGGGAGAGAGAGATTAGAAT
GAATTCAGGTGGGGCCATGGGTTTGGGCGATATGTCCTTCGGTGCAGCTGGCCAGAAGTTCCCAATGGGTGGACTTGGCT
TTGAGGGCCAGCAAGGGATGGGAGCATCTCCAGGAGGCTTGATGGGCAATGACATGCGCAATGAGCGCTTCTCCCAGGGT
GGCCCTAGGGGAATGGGTCCTGGTAACCCTGGCTATGGTAGGGTCCGGGAAGAATTTGACGGCCCTTTTAAGAAACCTCG
TTTTTAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003595 ortholog_one2many 1 retrogene
retro_cfam_198,
Callithrix jacchus ENSCJAG00000001431 ortholog_one2many 4 retrogenes
retro_cjac_1073, retro_cjac_2542, retro_cjac_2697, retro_cjac_486,
Felis catus ENSFCAG00000031287 ortholog_one2one 1 retrogene
retro_fcat_1989,
Gasterosteus aculeatus ENSGACG00000002034 ortholog_one2one 1 retrogene
retro_gacu_13,
Gadus morhua ENSGMOG00000011950 ortholog_one2many 1 retrogene
retro_gmor_20,
Macropus eugenii ENSMEUG00000014082 ortholog_one2one 1 retrogene
retro_meug_164,
Oryctolagus cuniculus ENSOCUG00000001877 ortholog_one2one 1 retrogene
retro_ocun_1834,
Oreochromis niloticus ENSONIG00000017737 ortholog_one2one 1 retrogene
retro_onil_21,
Sarcophilus harrisii ENSSHAG00000016107 ortholog_one2many 1 retrogene
retro_shar_36,
Takifugu rubripes ENSTRUG00000003783 ortholog_one2one 1 retrogene
retro_trub_8,
Drosophila melanogaster FBgn0004227 ortholog_many2many 1 retrogene
retro_dmel_11,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tnig_32 61.07 50.17
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Download FASTA sequences of all ENSTNIG00000011331 retrocopies