Parental gene: | aldh6a1, ENSXETG00000013304 |
| Aliases: | None |
| Description: | aldehyde dehydrogenase 6 family, member A1 [Source:Jamboree;Acc:XB-GENE-1006692] |
| Organism: | Xenopus (Xenopus tropicalis) |
| Coordinates: | GL173025.1:554469..571543(-) |
>ENSXETG00000013304
ATGATGCGGATCAGAGGAATAGTGAGGGCTTCAGCCCACCTCAGACAGGCACATTTCTCTTCTTCTGCAGCAGTGCCTCG
GACCAAACTTTTCATCAATGGACAATTTGTGGATTCTGAGACCTCAGAATGGATTGATGTTCACAACCCGGCAACCAATG
AGGTGATTGGAAGAGTTCCCCAGGCAACACAGAGTGAGATGGAGGCAGCGGTAAATGCATGTCAGCGTACTTTTCCAGCC
TGGTCTGAGACTTCCATTTTAAACCGACAACAGATCTTTTTACGCTACCAGCAACTCATAAAAGACAATCTGAAAGAGGT
GGCACGTCTGATAACACTGGAGCAAGGAAAGACTTTGGCAGATGCAGAAGGGGATGTATTCCGTGGACTGCAGGTGGTGG
AACATGCGTGTAGTGTGACCTCTCTGATGCTAGGAGAAACCCTTTCATCACTCACAAAGGATATGGACACATTTACATTT
CGCCTACCTCTGGGTGTATGTGCTGGCATTGCACCTTTTAACTTCCCTGCCATGATCCCATTATGGATGTTTCCTATGGC
CATGGTTTGTGGAAACACCTACTTGATGAAGCCATCAGAACGTGTTCCAGGAGCCACTATGTTTCTTGTTCAACTACTGC
AGGATGCTGGCGTTCCTGATGGGACCATAAACATTATCCATGGACAACATGCAGCTGTGAATTTTATCTGTGACCATCCA
GCCATTCGAGCTATCAGTTTTGTGGGCTCTAACCAGGCTGGAGAATACATCTATGATAGGGGATCCCGAAATGGCAAGAG
AGTTCAATCTAACATGGGGGCAAAAAACCATGGGGTAGTTATGCCAGATGCTAATAAGGAGAACACCCTGAACCAGCTAG
TAGGAGCAGCATTCGGAGCTGCTGGACAGCGCTGCATGGCTCTTTCCACAGCTGTTCTGGTTGGAGAAGCAAAGCAATGG
CTTCCAGAGTTGGTTGAAAAAGCAAAGAAGTTACAGGTTAATGCTGGTGATCAACCTGGAGCTGATCTGGGACCGCTAAT
CAGTCCAGCTGCAAAAGATCGTGTTTGCAGCTTAGTAGAGAGTGGTGTCAGGGAAGGTGCAACTCTATTGCTAGATGGCC
GTGATGTTAATGTGAAAGGGTTTGAGAACGGCAACTTTGTGGGACCAACAATTCTGGCAAATGTTCAGCCACACATGACC
TGCTATAAGGAGGAGATTTTCGGGCCAGTTCTGGTCATATTAGAGGCAGATACTCTGGATGATGCCCTTAAAATTGTGAA
CAGCAATCCATATGGCAATGGGACAGCCATCTTTACAACAAATGGAGCAACTGCTCGAAAATACACTCACTTAGTGGATG
TGGGCCAGGTGGGAGTAAATGTGCCAATCCCAGTACCACTCCCTATGTTCTCATTCACCGGATCTCGTGCTTCTTTCCGC
GGAGACACCAACTTTTATGGAAAACAGGGTGTGCACTTCTATACCCAGCTGAAGACTGTAACTTCTCAGTGGAAGGAAGA
AGATTCCACATTGACCAGCCCGGCTGTGGTGATGCCAACCATGGGACGTTGA
ATGATGCGGATCAGAGGAATAGTGAGGGCTTCAGCCCACCTCAGACAGGCACATTTCTCTTCTTCTGCAGCAGTGCCTCG
GACCAAACTTTTCATCAATGGACAATTTGTGGATTCTGAGACCTCAGAATGGATTGATGTTCACAACCCGGCAACCAATG
AGGTGATTGGAAGAGTTCCCCAGGCAACACAGAGTGAGATGGAGGCAGCGGTAAATGCATGTCAGCGTACTTTTCCAGCC
TGGTCTGAGACTTCCATTTTAAACCGACAACAGATCTTTTTACGCTACCAGCAACTCATAAAAGACAATCTGAAAGAGGT
GGCACGTCTGATAACACTGGAGCAAGGAAAGACTTTGGCAGATGCAGAAGGGGATGTATTCCGTGGACTGCAGGTGGTGG
AACATGCGTGTAGTGTGACCTCTCTGATGCTAGGAGAAACCCTTTCATCACTCACAAAGGATATGGACACATTTACATTT
CGCCTACCTCTGGGTGTATGTGCTGGCATTGCACCTTTTAACTTCCCTGCCATGATCCCATTATGGATGTTTCCTATGGC
CATGGTTTGTGGAAACACCTACTTGATGAAGCCATCAGAACGTGTTCCAGGAGCCACTATGTTTCTTGTTCAACTACTGC
AGGATGCTGGCGTTCCTGATGGGACCATAAACATTATCCATGGACAACATGCAGCTGTGAATTTTATCTGTGACCATCCA
GCCATTCGAGCTATCAGTTTTGTGGGCTCTAACCAGGCTGGAGAATACATCTATGATAGGGGATCCCGAAATGGCAAGAG
AGTTCAATCTAACATGGGGGCAAAAAACCATGGGGTAGTTATGCCAGATGCTAATAAGGAGAACACCCTGAACCAGCTAG
TAGGAGCAGCATTCGGAGCTGCTGGACAGCGCTGCATGGCTCTTTCCACAGCTGTTCTGGTTGGAGAAGCAAAGCAATGG
CTTCCAGAGTTGGTTGAAAAAGCAAAGAAGTTACAGGTTAATGCTGGTGATCAACCTGGAGCTGATCTGGGACCGCTAAT
CAGTCCAGCTGCAAAAGATCGTGTTTGCAGCTTAGTAGAGAGTGGTGTCAGGGAAGGTGCAACTCTATTGCTAGATGGCC
GTGATGTTAATGTGAAAGGGTTTGAGAACGGCAACTTTGTGGGACCAACAATTCTGGCAAATGTTCAGCCACACATGACC
TGCTATAAGGAGGAGATTTTCGGGCCAGTTCTGGTCATATTAGAGGCAGATACTCTGGATGATGCCCTTAAAATTGTGAA
CAGCAATCCATATGGCAATGGGACAGCCATCTTTACAACAAATGGAGCAACTGCTCGAAAATACACTCACTTAGTGGATG
TGGGCCAGGTGGGAGTAAATGTGCCAATCCCAGTACCACTCCCTATGTTCTCATTCACCGGATCTCGTGCTTCTTTCCGC
GGAGACACCAACTTTTATGGAAAACAGGGTGTGCACTTCTATACCCAGCTGAAGACTGTAACTTCTCAGTGGAAGGAAGA
AGATTCCACATTGACCAGCCCGGCTGTGGTGATGCCAACCATGGGACGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 46 .87 RPM |
| SRP007412_skeletal_muscle | 63 .56 RPM |
| SRP007412_heart | 162 .80 RPM |
| SRP007412_kidney | 162 .80 RPM |
| SRP007412_liver | 91 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000002670 | ortholog_one2one | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000020930 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xtro_56 | 57.30 | 89.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXETG00000013304 retrocopies