Parental gene: | MTR_7g091230 |
| Aliases: | None |
| Description: | transcription initiation factor IIB |
| Organism: | Barrel medic (Medicago truncatula) |
| Coordinates: | 7:36009851..36014917(-) |
>MTR_7g091230
ATGTCCGATGCGTTTTGCAGCGACTGCAAGCGAGCGACGGAGGTGGTGTTCGACCACTCCGCCGGCGATGCAGTCTGTTC
GGAGTGTGGTCTCGTCTTGGAATCTCACTCCATCGATGAAACCTCCGAGTGGCGAACCTTCGCCAACGAATCCGGTGATA
ACGATCCCGTTCGTGTCGGTGGTCCCAGTAACCCTCTCCTTACCGATGGTGGTCTCTCCACCGTCATTGCTAAGCCTAAC
GGTGCTTCCGGTGATTTTCTCTCGTCTTCTCTCGGCCGTTGGCAGAATCGCGGTTCTAATCCCGATCGTGGATTGATCCT
TGCGTTCAAAACTATTGGTACTATGGCTGAAAGGTTGGGACTGGTTCCGACCATCAAGGACCGAGCTAATGAGATATATA
AGCGGGTTGAAGATCAGAAGTCTAGCAGGGGAAGAAATCAGGACGCATTATTGGCTGCTTGCCTCTACATTGCTTGTCGA
CAAGAAGACAAGCCACGCACCGTAAAGGAAATTTGCTCAATTGCCAATGGAGCCACCAAGAAGGAAATTGGCCGCGCAAA
AGAATACATAGTGAAACAACTGGGTTTGGAGAATGGCGGTCAATCTGTTGAAATGGGAACAATTCATGCTGGGGACTTTA
TGAGACGATTTTGTTCTAATCTTGGTATGAATCATCAAGCTGTTAAAGCTGCTCAGGAATCTGTTCAGAAATCCGAAGAA
TTTGATATAAGGAGAAGTCCCATATCAATTGCTGCAGCAGTTATATACATCATTACTCAGCTCTCAGATGATAAAAAACC
TCTCAAAGATATATCAGTTGCTACAGGAGTTGCAGAAGGAACCATTAGGAACTCATACAAGGATCTCTATCCCCATGTTT
CAAAGATAATACCAAACTGGTATGCAAAGGAAGAGGATCTGAAGAACCTTTGCAGCCCTTGA
ATGTCCGATGCGTTTTGCAGCGACTGCAAGCGAGCGACGGAGGTGGTGTTCGACCACTCCGCCGGCGATGCAGTCTGTTC
GGAGTGTGGTCTCGTCTTGGAATCTCACTCCATCGATGAAACCTCCGAGTGGCGAACCTTCGCCAACGAATCCGGTGATA
ACGATCCCGTTCGTGTCGGTGGTCCCAGTAACCCTCTCCTTACCGATGGTGGTCTCTCCACCGTCATTGCTAAGCCTAAC
GGTGCTTCCGGTGATTTTCTCTCGTCTTCTCTCGGCCGTTGGCAGAATCGCGGTTCTAATCCCGATCGTGGATTGATCCT
TGCGTTCAAAACTATTGGTACTATGGCTGAAAGGTTGGGACTGGTTCCGACCATCAAGGACCGAGCTAATGAGATATATA
AGCGGGTTGAAGATCAGAAGTCTAGCAGGGGAAGAAATCAGGACGCATTATTGGCTGCTTGCCTCTACATTGCTTGTCGA
CAAGAAGACAAGCCACGCACCGTAAAGGAAATTTGCTCAATTGCCAATGGAGCCACCAAGAAGGAAATTGGCCGCGCAAA
AGAATACATAGTGAAACAACTGGGTTTGGAGAATGGCGGTCAATCTGTTGAAATGGGAACAATTCATGCTGGGGACTTTA
TGAGACGATTTTGTTCTAATCTTGGTATGAATCATCAAGCTGTTAAAGCTGCTCAGGAATCTGTTCAGAAATCCGAAGAA
TTTGATATAAGGAGAAGTCCCATATCAATTGCTGCAGCAGTTATATACATCATTACTCAGCTCTCAGATGATAAAAAACC
TCTCAAAGATATATCAGTTGCTACAGGAGTTGCAGAAGGAACCATTAGGAACTCATACAAGGATCTCTATCCCCATGTTT
CAAAGATAATACCAAACTGGTATGCAAAGGAAGAGGATCTGAAGAACCTTTGCAGCCCTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI4G36290 | ortholog_one2many | 1 retrogene | |
| Aegilops tauschii | F775_29675 | ortholog_many2many | 1 retrogene | |
| Hordeum vulgare | MLOC_10647 | ortholog_one2many | 1 retrogene | |
| Sorghum bicolor | Sb02g031020 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mtru_3 | 92.65 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mtru_26 | 79.39 | 72.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all MTR_7g091230 retrocopies