Parental gene: | OBART02G31860 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza barthii |
| Coordinates: | 2:27122891..27126677(+) |
>OBART02G31860
ATGCGCGCGGCGGTGCAGGGGCGGGCACATGCGTGGACGACGACGACGACGACACCGCCGGGCGCGATGAGAGGCCGGGC
GCTGGTCCTCGTGGCCGCGCTGCTGCTGCAGCTGCTTCTCCTCGCCGCTGCCGGTGGCGCGGGCGCGGCGGCGACGGAGA
GGAAGGCGCACAACTACGAGGACGCGCTGCGGAAGAGCCTGCTCTACTTCGAGGCGCAGCGGTCGGGGCGGCTCCCGCAC
AACCAGCGCGTCGCGTGGCGCGACCACTCCGGCCTCACCGACGGCCTCGAGCAAGGGGTGGATTTGGTGGGAGGCTACTA
CGACGCCGGCGACCATGTCAAGTTCGGGCTGCCCATGGCGTTCACGGTGACGATGCTGTCGTGGAGCATGATCGAGTACG
GCGACGACGTCGAGGCCGCCGGCGAGCTCGGCCACGCGCTCGAGGCCATCAAGTGGGGCACTGACTACTTCATCAAGGCG
CACACCAAGCCCAACGAGCTCTGGGCTGAGGTCGGGGACGGCGACACGGATCACTACTGCTGGCAGCGGCCGGAGGACAT
GACGACGTCGAGGCAGGCGTACAAGGTGGACCGGGAGCGGCCGGGCTCCGACGTCGCCGGCGAGACGGCGGCGGCGATGG
CCGCCGCGTCCATCGTCTTCCGCAAGTCCAACCCGCACTACGCGAGCCTCCTCCTGCACCACGCCCAGCAGCTGTTCGAG
TTTGCCGACAAGTACAGAGGGAAGTATGACAGCAGTATCGCCGAGGTGAAGAGCTACTACGCGTCGGTGAGCGGGTACAA
GGACGAGCTCCTTTGGGCCGCATTGTGGCTGCACCGGGCCACCGGCAAGGCCCATTACCTCGACTACGTCGTGGACAACG
CCGACTGCTTCGGTGGCACCGGCTGGGCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCGTCCAGATCCTCGCC
GCAAGACTGCTGCTGAGAGGAGAGCACGAGGAGCGGCACAGGAGCACGCTGGAGCAGTACAGGGCGAAGGCGGAGCACTA
CGTGTGCGGGTGCCTGGGGCGGAACGCGGACGGCGGCGCGGACGCGAACGTGGAGCGGAGCCCGGGCGGGATGCTGTACG
TGAGGCAGTGGAACAACATGCAGTACGTGACCAACGCGGCGTTCCTCCTCGCGGCGTACGCGGACTACCTGGGCGACGAC
GCGGACGGCGCCGTGTCGTGCGCGGGCGGCGAGACGGCGGGCGCGGGCGAGGTGGCGGCGCTCGCGAGGGCGCAGGTGGA
CTACGTGCTGGGCACCAACCCGAGGGGGATCAGCTACCTGGTCGGGTACGGCGCCAAGTACCCGAACAGGGTGCACCACC
GCGCCGCGTCCATCGTGCCGTACAAGCACAGCAAGGAGTTCATCGGGTGCACGCAGGGGTTCGACCACTGGTTCGGTCGC
CGGAGCTCCAACCCGAACGTCCTCGTCGGCGCCATCGTCGGTGGGCCGGACCGGCGGGACAGGTTCAGGGACAACCGGGA
GAACTACATGCAGACGGAGGCGTGCACGTACAACACGGCGCCCATGGTCGGCATGTTCGCCAAGCTGAACAGGATGGCCC
GGCAGGAGAGGGAGCAGGAGGAGGTGGCGGCTCCGGCGAGGAGTACGGCGGCCGATGTGTAA
ATGCGCGCGGCGGTGCAGGGGCGGGCACATGCGTGGACGACGACGACGACGACACCGCCGGGCGCGATGAGAGGCCGGGC
GCTGGTCCTCGTGGCCGCGCTGCTGCTGCAGCTGCTTCTCCTCGCCGCTGCCGGTGGCGCGGGCGCGGCGGCGACGGAGA
GGAAGGCGCACAACTACGAGGACGCGCTGCGGAAGAGCCTGCTCTACTTCGAGGCGCAGCGGTCGGGGCGGCTCCCGCAC
AACCAGCGCGTCGCGTGGCGCGACCACTCCGGCCTCACCGACGGCCTCGAGCAAGGGGTGGATTTGGTGGGAGGCTACTA
CGACGCCGGCGACCATGTCAAGTTCGGGCTGCCCATGGCGTTCACGGTGACGATGCTGTCGTGGAGCATGATCGAGTACG
GCGACGACGTCGAGGCCGCCGGCGAGCTCGGCCACGCGCTCGAGGCCATCAAGTGGGGCACTGACTACTTCATCAAGGCG
CACACCAAGCCCAACGAGCTCTGGGCTGAGGTCGGGGACGGCGACACGGATCACTACTGCTGGCAGCGGCCGGAGGACAT
GACGACGTCGAGGCAGGCGTACAAGGTGGACCGGGAGCGGCCGGGCTCCGACGTCGCCGGCGAGACGGCGGCGGCGATGG
CCGCCGCGTCCATCGTCTTCCGCAAGTCCAACCCGCACTACGCGAGCCTCCTCCTGCACCACGCCCAGCAGCTGTTCGAG
TTTGCCGACAAGTACAGAGGGAAGTATGACAGCAGTATCGCCGAGGTGAAGAGCTACTACGCGTCGGTGAGCGGGTACAA
GGACGAGCTCCTTTGGGCCGCATTGTGGCTGCACCGGGCCACCGGCAAGGCCCATTACCTCGACTACGTCGTGGACAACG
CCGACTGCTTCGGTGGCACCGGCTGGGCCATCACCGAGTTCAGCTGGGACGTCAAGTACGCCGGCGTCCAGATCCTCGCC
GCAAGACTGCTGCTGAGAGGAGAGCACGAGGAGCGGCACAGGAGCACGCTGGAGCAGTACAGGGCGAAGGCGGAGCACTA
CGTGTGCGGGTGCCTGGGGCGGAACGCGGACGGCGGCGCGGACGCGAACGTGGAGCGGAGCCCGGGCGGGATGCTGTACG
TGAGGCAGTGGAACAACATGCAGTACGTGACCAACGCGGCGTTCCTCCTCGCGGCGTACGCGGACTACCTGGGCGACGAC
GCGGACGGCGCCGTGTCGTGCGCGGGCGGCGAGACGGCGGGCGCGGGCGAGGTGGCGGCGCTCGCGAGGGCGCAGGTGGA
CTACGTGCTGGGCACCAACCCGAGGGGGATCAGCTACCTGGTCGGGTACGGCGCCAAGTACCCGAACAGGGTGCACCACC
GCGCCGCGTCCATCGTGCCGTACAAGCACAGCAAGGAGTTCATCGGGTGCACGCAGGGGTTCGACCACTGGTTCGGTCGC
CGGAGCTCCAACCCGAACGTCCTCGTCGGCGCCATCGTCGGTGGGCCGGACCGGCGGGACAGGTTCAGGGACAACCGGGA
GAACTACATGCAGACGGAGGCGTGCACGTACAACACGGCGCCCATGGTCGGCATGTTCGCCAAGCTGAACAGGATGGCCC
GGCAGGAGAGGGAGCAGGAGGAGGTGGCGGCTCCGGCGAGGAGTACGGCGGCCGATGTGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA009019 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA02G0273700 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI02G33530 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0738600 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_obar_24 | 71.06 | 69.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OBART02G31860 retrocopies