Parental gene: | OPUNC01G02400 |
| Aliases: | None |
| Description: | None |
| Organism: | Red rice (Oryza punctata) |
| Coordinates: | 1:1880657..1887057(+) |
>OPUNC01G02400
ATGGGAGAGGTTGCAGAAGACATCTACACGCAAGATGGCACCGTGGACGTCAAGGGCAACCCGGCTACAAAGAAGAACAC
CGGCAACTGGCGCGCCTGCCCCTACATCCTCGCTAACGAATGCTGCGAGAGGCTGGCTTACTATGGCATGAGCACCAACC
TGGTGAACTACATGAAGACCCGGCTCGGGCAGGAGAGCGCCATTGCCGCAAACAATGTCACAAACTGGTCGGGGACTTGC
TACATCACTCCCCTCCTCGGTGCCTTCTTGGCTGATGCCTACATGGGCAGATTCTGGACCATTGCCAGCTTCATGATCAT
CTACATCCTGGGGTTGGCGTTGCTGACAATGGCGTCTTCGGTGAAGGGGCTAGTGCCGGCGTGCGACGCCGGCGGCGGAG
CGTGTCATCCGACGGAGGCGCAGACGGGGGTGGTGTTCTTGGCGCTGTACCTGATCGCGCTGGGAACGGGAGGGATCAAG
CCGTGCGTGTCGTCGTTTGGCGCGGACCAGTTCGACGAGAACGACGAGAGGGAGAAGCGGAGCAAGAGCAGCTTCTTCAA
CTGGTTCTACTTCTCCATCAACATCGGCGCGCTGGTGGCGTCGTCGGTGCTGGTGTACGTGCAGACGCACGTCGGGTGGG
GTTGGGGATTCGGCATTCCGGCCGTCGTCATGGCCGTCGCCGTCGTCAGCTTCTTCGTCGGCACGCCGTTGTACAGGCAC
CAGCGCCCCGGTGGCAGCCCGCTCACGCGGATCGCGCAGGTGCTCGTCGCGTCGGCGAGGAAGTGGGGCGTCGATGTCCC
CGCCGACAAGTCGCGGCTGCACGAGACGCTCGACAAGGAGTCCGGCATCGAGGGCAGCCGCAAGCTGGAGCACACCGAGC
AGTTCGCGTGCCTTGACAGGGCGGCGGTGGAGACGCCGGAGGACAAGGCGGCGGGGAGGACGAGCGCGTGGAGGCTGTGC
ACGGTGACGCAGGTGGAGGAGCTGAAGAGCGTGGTGCGGCTGCTGCCGATCTGGGCGAGCGGGATCGTGTTCGCGACGGT
GTACGGGCAGATGAGCACCATGTTCGTGCTGCAGGGGAACACGCTCGACGCCAGCATGGGGCCGCACTTCTCCATCCCGG
CGGCGTCGCTCTCCATCTTCGACACGCTCAGCGTCATCGTCTGGGTGCCAGTCTACGACCGCCTCATCGTGCCGGCGGTG
CGCGCCGTGACGGGGCGGCCACGCGGGTTCACCCAGCTGCAGCGGATGGGGATCGGGCTCGTCATCTCCGTCTTCTCCAT
GCTCGCCGCCGGCGTGCTCGACGTGATCAGGCTGCGCGCCATCGCTCGCCACGGGCTCTACGGCGAGAAGGACATCGTGC
CGATCTCCATCTTCTGGCAGGTGCCGCAGTATTTCATCATCGGCGCCGCCGAGGTGTTCACGTTCGTCGGGCAGCTGGAG
TTCTTCTACGACCAGGCGCCCGACGCCATGCGCAGCATGTGCTCGGCGCTGTCGCTCACCACCGTGGCGCTCGGCAACTA
CCTCAGCACGCTGCTCGTCACCATCGTCACCCACGTCACCACCAGGAACGGCGCCGTCGGGTGGATCCCGGACAACCTCA
ACCGCGGCCACCTCGACTACTTCTTCTGGCTGCTCGCCGTGCTCAGCACCATCAACTTCGCCGTCTACCTTGTCATCGCC
GGCTGGTACACATACAAGAAGACGGCGGATTCACCGGACGACAAAGCCGAGCACGCCGGAGCAAACTGA
ATGGGAGAGGTTGCAGAAGACATCTACACGCAAGATGGCACCGTGGACGTCAAGGGCAACCCGGCTACAAAGAAGAACAC
CGGCAACTGGCGCGCCTGCCCCTACATCCTCGCTAACGAATGCTGCGAGAGGCTGGCTTACTATGGCATGAGCACCAACC
TGGTGAACTACATGAAGACCCGGCTCGGGCAGGAGAGCGCCATTGCCGCAAACAATGTCACAAACTGGTCGGGGACTTGC
TACATCACTCCCCTCCTCGGTGCCTTCTTGGCTGATGCCTACATGGGCAGATTCTGGACCATTGCCAGCTTCATGATCAT
CTACATCCTGGGGTTGGCGTTGCTGACAATGGCGTCTTCGGTGAAGGGGCTAGTGCCGGCGTGCGACGCCGGCGGCGGAG
CGTGTCATCCGACGGAGGCGCAGACGGGGGTGGTGTTCTTGGCGCTGTACCTGATCGCGCTGGGAACGGGAGGGATCAAG
CCGTGCGTGTCGTCGTTTGGCGCGGACCAGTTCGACGAGAACGACGAGAGGGAGAAGCGGAGCAAGAGCAGCTTCTTCAA
CTGGTTCTACTTCTCCATCAACATCGGCGCGCTGGTGGCGTCGTCGGTGCTGGTGTACGTGCAGACGCACGTCGGGTGGG
GTTGGGGATTCGGCATTCCGGCCGTCGTCATGGCCGTCGCCGTCGTCAGCTTCTTCGTCGGCACGCCGTTGTACAGGCAC
CAGCGCCCCGGTGGCAGCCCGCTCACGCGGATCGCGCAGGTGCTCGTCGCGTCGGCGAGGAAGTGGGGCGTCGATGTCCC
CGCCGACAAGTCGCGGCTGCACGAGACGCTCGACAAGGAGTCCGGCATCGAGGGCAGCCGCAAGCTGGAGCACACCGAGC
AGTTCGCGTGCCTTGACAGGGCGGCGGTGGAGACGCCGGAGGACAAGGCGGCGGGGAGGACGAGCGCGTGGAGGCTGTGC
ACGGTGACGCAGGTGGAGGAGCTGAAGAGCGTGGTGCGGCTGCTGCCGATCTGGGCGAGCGGGATCGTGTTCGCGACGGT
GTACGGGCAGATGAGCACCATGTTCGTGCTGCAGGGGAACACGCTCGACGCCAGCATGGGGCCGCACTTCTCCATCCCGG
CGGCGTCGCTCTCCATCTTCGACACGCTCAGCGTCATCGTCTGGGTGCCAGTCTACGACCGCCTCATCGTGCCGGCGGTG
CGCGCCGTGACGGGGCGGCCACGCGGGTTCACCCAGCTGCAGCGGATGGGGATCGGGCTCGTCATCTCCGTCTTCTCCAT
GCTCGCCGCCGGCGTGCTCGACGTGATCAGGCTGCGCGCCATCGCTCGCCACGGGCTCTACGGCGAGAAGGACATCGTGC
CGATCTCCATCTTCTGGCAGGTGCCGCAGTATTTCATCATCGGCGCCGCCGAGGTGTTCACGTTCGTCGGGCAGCTGGAG
TTCTTCTACGACCAGGCGCCCGACGCCATGCGCAGCATGTGCTCGGCGCTGTCGCTCACCACCGTGGCGCTCGGCAACTA
CCTCAGCACGCTGCTCGTCACCATCGTCACCCACGTCACCACCAGGAACGGCGCCGTCGGGTGGATCCCGGACAACCTCA
ACCGCGGCCACCTCGACTACTTCTTCTGGCTGCTCGCCGTGCTCAGCACCATCAACTTCGCCGTCTACCTTGTCATCGCC
GGCTGGTACACATACAAGAAGACGGCGGATTCACCGGACGACAAAGCCGAGCACGCCGGAGCAAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Sorghum bicolor | Sb03g006420 | ortholog_one2one | 1 retrogene | |
| Setaria italica | Si000816m.g | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opun_3 | 68.19 | 96.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OPUNC01G02400 retrocopies