Parental gene:

OPUNC02G13140

Aliases:None
Description:regulatory particle triple-A ATPase 3 [Source:Projected from Arabidopsis thaliana (AT5G58290) TAIR;Acc:AT5G58290]
Organism:Red rice (Oryza punctata)
Coordinates:2:13816938..13821558(+)


>OPUNC02G13140
ATGTCGACCGCCGCCACCGCCCCGCCGCCTGCCGCGGCCCTCCCGGCGGCTCCCCCGCCGTCCTACCCCGCCACCTCCGC
GCCCTCCGCCTCCGCGGCTGCCGCCGAGGACGACGACGACCTCTACGGCCGCCTCAAGTCGCTCCAGCGACACATGGAGT
TCGTCGAGATACAGGAGGAGTACGTCAAGGACGAGCAGAAGAACCTGAAGCGCGAGCTGCTGCGCGCGCAGGAGGAGGTC
AAGCGGATCCAGTCCGTCCCGCTCGTGATCGGCCAGTTCATGGAGATGGTCGACGGCAATAACGGAATCGTCGGATCCAC
CACCGGGAGCAACTATTATGTGCGGATCCTGAGCACCATCAACCGCGAGCTGCTCAAGCCGTCGGCGTCCGTGGCGCTGC
ACCGCCACTCGAATGCGCTCGTCGACGTGCTGCCGCCCGAGGCGGACTCCAGCATCTCTCTGCTCGGCTCATCGGAGAAG
CCCAACGTCACTTACACGGATATTGGAGGATGTGACATCCAAAAACAAGAAATTCGGGAGGCTGTTGAATTACCGCTGAC
ACATCATGAGCTGTACAAGCAGATTGGTATTGATCCTCCAAGAGGCGTGCTTCTGTATGGTCCTCCTGGTACTGGCAAAA
CTATGCTCGCCAAAGCTGTGGCACACCACACCACTGCTGCATTTATCAGAGTTGTTGGTTCAGAGTTTGTGCAGAAGTAC
CTGGGTGAGGGGCCTAGGATGGTTCGAGATGTATTCCGTTTGGCTAAAGAGAATGCCCCAGCTATCATATTCATCGATGA
GGTTGATGCTATAGCAACTGCTCGTTTTGATGCTCAGACTGGTGCTGACCGAGAAGTTCAGCGTATTCTTATGGAACTAC
TTAATCAGATGGATGGATTTGACCAAACAGTGAATGTGAAGGTTATAATGGCGACCAACAGGGCGGATACCCTAGACCCT
GCTCTGTTACGTCCAGGTAGATTGGACAGGAAAATCGAGTTCCCTCTTCCAGATCGTCGGCAGAAGAGGCTTGTTTTCCA
AGTCTGTACTGCTAAAATGAACTTGAGTGATGAGGTTGATTTGGAAGATTATGTTTCCAGACCAGATAAAATTAGTGCTG
CTGATATTGCTGCTATCTGTCAAGAAGCTGGTATGCATGCTGTGCGCAAAAATCGGTATGTTATCCTCCCCAAGGACTTC
GAGAAGGGTTACCGAACCAATGTCAAGAAGCCTGAGACTGACTTTGACTTCTACAAATGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA008091 ortholog_one2one 1 retrogene
retro_oind_47,
Aegilops tauschii F775_28952 ortholog_one2many 1 retrogene
retro_atau_13,
Leersia perrieri LPERR02G11870 ortholog_one2one 1 retrogene
retro_lper_5,
Oryza barthii OBART02G14640 ortholog_one2one 1 retrogene
retro_obar_11,
Oryza glaberrima ORGLA02G0127200 ortholog_one2one 1 retrogene
retro_ogla_44,
Oryza sativa japonica OS02G0325100 ortholog_one2one 1 retrogene
retro_osat_48,
Triticum aestivum Traes_2AL_80D15B4FB ortholog_one2many 2 retrogenes
retro_taes_103, retro_taes_107,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opun_13 54.20 91.41
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Download FASTA sequences of all OPUNC02G13140 retrocopies