Parental gene: | OPUNC04G04310 |
| Aliases: | None |
| Description: | None |
| Organism: | Red rice (Oryza punctata) |
| Coordinates: | 4:8356911..8358027(-) |
>OPUNC04G04310
ATGTCGAAGGAGGTGAGCGAGGAGCCGGAGCACGCGCGGCCCAAGGACTACACCGACCCGCCGCCGGCGCCACTGTTCGA
CGTTGGTGAGCTCCGGCTGTGGTCCTTCTACCGGGCACTCATTGCTGAGTTCATCGCCACTCTCCTGTTCCTGTACATCA
CCGTCGCCACCGTCATCGGGTACAAGGTGCAGTCGTCCGCCGACCAGTGCGGCGGTGTTGGCACCCTCGGCATCGCCTGG
GCATTCGGTGGCATGATCTTTATCCTCGTCTACTGCACCGCCGGCATCTCCGGAGGGCACATTAACCCGGCGGTGACGTT
CGGGCTGCTGCTGGCGAGGAAGGTGTCGGTGATTCGCGCGGTGATGTACATCGTGGCGCAGTGCCTGGGCGGCATCGCGG
GCGTGGGCATCGTGAAGGGCATCATGAAGCACCAGTACAACGCCAACGGCGGCGGCGCCAACATGGTGGCCAGCGGCTAC
TCCACCGGCACCGCCCTCGGCGCCGAGATCATTGGCACCTTCGTCCTCGTCTACACCGTTTTCTCCGCCACCGACCCAAA
GCGCAACGCCCGCGACTCCCACGTCCCAGTGCTCGCGCCGCTGCCCATCGGGTTCGCCGTGTTCATGGTGCACCTGGCCA
CCATCCCCATCACCGGCACGGGCATCAACCCTGCCCGGAGCATCGGCGCCGCCGTCATCTACAACCAGAAGAAGGCATGG
GACGACCACTGGATCTTCTGGGCGGGGCCGTTCATCGGAGCGCTGGCGGCGGCGGCGTACCACCAATACATCCTCCGGGC
GGCGGCCATCAAGGCGCTAGGCTCCTTCCGGAGCAACCCCAGCAACTGA
ATGTCGAAGGAGGTGAGCGAGGAGCCGGAGCACGCGCGGCCCAAGGACTACACCGACCCGCCGCCGGCGCCACTGTTCGA
CGTTGGTGAGCTCCGGCTGTGGTCCTTCTACCGGGCACTCATTGCTGAGTTCATCGCCACTCTCCTGTTCCTGTACATCA
CCGTCGCCACCGTCATCGGGTACAAGGTGCAGTCGTCCGCCGACCAGTGCGGCGGTGTTGGCACCCTCGGCATCGCCTGG
GCATTCGGTGGCATGATCTTTATCCTCGTCTACTGCACCGCCGGCATCTCCGGAGGGCACATTAACCCGGCGGTGACGTT
CGGGCTGCTGCTGGCGAGGAAGGTGTCGGTGATTCGCGCGGTGATGTACATCGTGGCGCAGTGCCTGGGCGGCATCGCGG
GCGTGGGCATCGTGAAGGGCATCATGAAGCACCAGTACAACGCCAACGGCGGCGGCGCCAACATGGTGGCCAGCGGCTAC
TCCACCGGCACCGCCCTCGGCGCCGAGATCATTGGCACCTTCGTCCTCGTCTACACCGTTTTCTCCGCCACCGACCCAAA
GCGCAACGCCCGCGACTCCCACGTCCCAGTGCTCGCGCCGCTGCCCATCGGGTTCGCCGTGTTCATGGTGCACCTGGCCA
CCATCCCCATCACCGGCACGGGCATCAACCCTGCCCGGAGCATCGGCGCCGCCGTCATCTACAACCAGAAGAAGGCATGG
GACGACCACTGGATCTTCTGGGCGGGGCCGTTCATCGGAGCGCTGGCGGCGGCGGCGTACCACCAATACATCCTCCGGGC
GGCGGCCATCAAGGCGCTAGGCTCCTTCCGGAGCAACCCCAGCAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA009362 | ortholog_one2many | 1 retrogene | |
| Oryza longistaminata | KN540828.1_FG001 | ortholog_one2one | 1 retrogene | |
| Leersia perrieri | LPERR04G03430 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB0038G10090 | ortholog_one2many | 1 retrogene | |
| Oryza barthii | OBART04G05050 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM04G04240 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI04G05010 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA04G03300 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI04G05780 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS04G0233400 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opun_34 | 69.33 | 79.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OPUNC04G04310 retrocopies