Parental gene:

ORGLA09G0073400

Aliases:None
Description:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Source:Projected from Arabidopsis thaliana (AT2G38740) TAIR;Acc:AT2G38740]
Organism:African rice (Oryza glaberrima)
Coordinates:9:10354632..10357483(-)


>ORGLA09G0073400
ATGGCGGCCGCCACTCCCAACGGCATCCCAGCTTCCAGACCTCTGGCTTCATCTGTTCCAATTGAGGCAGTTCTGTTCGA
CATTGATGGGACCTTGTGCGACTCAGATCCTCTTCATCATGTGGCCTTCCAAGAAATGCTTCTTGAGATTGGGTATAACA
ACGGTGTGCCGATAGACGAGGAGTTTTTCATAAACAATATTGCTGGAAGGAGTGATGTTGAAGCTGCTCAGAATTTGTTC
CCTGATTGGCCCCTTGAGAAGGGGCTGAAATTCCTCGAGGACAAGGAAGCTAAATACAGAAGTTTGGCAAAGGAGCGTTT
GGAACCTGTAAAGGGCCTTGCTAAAGTGGTTCAGTGGGTCAAAGATCATGGATACAAGCGTGCGGCTGTAACCAATGCCC
CCAGGATTAATTCCGAGCTCATGATCTCCCTTCTTGGCCTCACAGATTTCTTCCAGGCCGTCATCGTTGGAGGCGAATGT
GAGAAGCCGAAACCCGCCCCATTCCCCTACCTGAAGGCTCTCAAGGAGCTTCAGGTGTCTGCGGACCACACCTTCATCTT
TGAGGATTCTGCTTCAGGCACACGTGCAGGCGTTGCTGCTGGAATTCCTGTTGTTGCTGTGGCAACAAGGAACCCAGAGA
AGTCCCTACTGGATGCAGGAGCCACGTTGATCATCAAGGATTATGAAGACCCCAAGCTTTGGAGCGCACTTGAAGAGATA
GACAGAGAGGAAGCCAAGCTAAAGAAAGCTGATGCATGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA029783 ortholog_one2one 1 retrogene
retro_oind_12,
Oryza barthii OBART09G09890 ortholog_one2one 1 retrogene
retro_obar_14,
Oryza glumaepatula OGLUM09G10170 ortholog_one2one 1 retrogene
retro_oglu_30,
Oryza meridionalis OMERI09G07660 ortholog_one2one 1 retrogene
retro_omer_18,
Oryza punctata OPUNC09G08360 ortholog_one2one 1 retrogene
retro_opun_16,
Oryza rufipogon ORUFI09G10540 ortholog_one2one 1 retrogene
retro_oruf_11,
Oryza sativa japonica OS09G0407700 ortholog_one2one 1 retrogene
retro_osat_26,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogla_33 52.65 89.29
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ORGLA09G0073400 retrocopies