Parental gene: | ORUFI01G47680 |
| Aliases: | None |
| Description: | None |
| Organism: | Brownbeard rice (Oryza rufipogon) |
| Coordinates: | 1:38796611..38800711(-) |
>ORUFI01G47680
ATGGCGGTTCGCCGCCGGCGACCCGGCCCCGTGGCGGCCGCCGTGCTGCTGCTACTCGCGGTGGCGACCCAGGCGGCGGC
GAGCCCGATAAAGACGGTGGTGGTGGTGGTGATGGAGAACCGGTCGTTCGACCACATGCTGGGGTGGATGAAGCGGCTGA
ACCCGGAGATCGACGGCGTGACCGGCGGCGAGTGGAACCCGACGAACGCCAGCGACCCGTCGTCGGGGCGCGTCTACTTC
GGCGAGGGCGCCGAGTACGTGGACCCAGACCCGGGCCACTCGTTCCAGGAGATCCGGCAGCAGATATTCGGGTCGGACGA
CGCGTCGGGGCCGGCGAGGATGGACGGCTTCGTGCAGCAGGCGCGGTCGCTGGGGGACAACATGACGGCGGCCGTCATGA
ACGGCTTCTCGCCGGACAGCGTCGCCGTGTACCGGGAGCTCGTCGGGGAGTTCGCGGTGTTCGACCGGTGGTTCGCGTCC
GTGCCGTCGTCGACGCAGCCCAACCGACTGTTCGTGCACTCCGCCACATCCGGCGGCGCCACCAGCAACAACCCAGAGCT
GCTGGCGAAGGGCTACCCGCAGCGTACAATCTTCGACAACGTGCACGACGCCGGGCTGTCGTTCGGGGTCTACTACCAGG
ACGTGCCGGCGGTGCTCTTCTACCGCAACCTGCGGAAGCTCAAGTACCTGACCAAGTTCCACCCGTTCCACGGCGCGTTC
CGCGACCACGCCGCCCGCGGCTCCCTCCCAAACTACGCCGTGGTGGAGCAGCACTACATGGACTCCAAGTCCCACCCGGC
CAACGACGACCACCCGTCGCACGACGTCTTCCAGGGCCAGATGCTCGTCAAGGAGGTGTACGAGACGCTCCGCGCCAGCC
CGCAGTGGAACCAGACGCTCATGGTCGTCACCTACGACGAGCACGGCGGCTTCTACGACCATGTCCCCACCCCCGTCACC
GGCGTCCCCAGCCCCGACGGCATCGTCGGCCCGCCGCCGTATAACTTCGCCTTTGATCGCCTCGGCGTCCGTGTCCCAGC
CATCGTCATCTCCCCCTGGATCAACAAGGGTACAGTTGTTCATGGGCCAAACGGGAGCCCAACCGCGACGTCGGAGTACG
AGCACTCGTCCATCCCCGCGACCGTGAAGAAACTCTTCGATCTGCCACAGGATTTCCTGACTAAAAGGGACGCCTGGGCT
GGAACGTTTGAGAGTGTCGTGCAAGGCAGAACTGAGCCAAGGACGGATTGCCCAGAGCAACTCCCAATGCCGATGAGGAT
ACGGCTGACGGAGGCGAACGAGGAGGCGAAGCTGAGTGAGTTCCAGCAGGAGCTGGTTCAGCTGGCGTCGGTGCTCAACG
GGGACCACCAGCTGAGCAGCCTGCAGGACACGATCAGGGACAGGATGAACGTCAGGGAAGGCATCGCGTACATGCGGGGC
GCTGTAAAGCGCTTCTTCGAGACCGGCATGTCAGCCAAGAGGATGGGCGTCGACGACGAGCAGATCGTCAAGATGAGGCC
ATCGCTCACCACCAGGACATCCCCTGCGATCGAGCAACCATAG
ATGGCGGTTCGCCGCCGGCGACCCGGCCCCGTGGCGGCCGCCGTGCTGCTGCTACTCGCGGTGGCGACCCAGGCGGCGGC
GAGCCCGATAAAGACGGTGGTGGTGGTGGTGATGGAGAACCGGTCGTTCGACCACATGCTGGGGTGGATGAAGCGGCTGA
ACCCGGAGATCGACGGCGTGACCGGCGGCGAGTGGAACCCGACGAACGCCAGCGACCCGTCGTCGGGGCGCGTCTACTTC
GGCGAGGGCGCCGAGTACGTGGACCCAGACCCGGGCCACTCGTTCCAGGAGATCCGGCAGCAGATATTCGGGTCGGACGA
CGCGTCGGGGCCGGCGAGGATGGACGGCTTCGTGCAGCAGGCGCGGTCGCTGGGGGACAACATGACGGCGGCCGTCATGA
ACGGCTTCTCGCCGGACAGCGTCGCCGTGTACCGGGAGCTCGTCGGGGAGTTCGCGGTGTTCGACCGGTGGTTCGCGTCC
GTGCCGTCGTCGACGCAGCCCAACCGACTGTTCGTGCACTCCGCCACATCCGGCGGCGCCACCAGCAACAACCCAGAGCT
GCTGGCGAAGGGCTACCCGCAGCGTACAATCTTCGACAACGTGCACGACGCCGGGCTGTCGTTCGGGGTCTACTACCAGG
ACGTGCCGGCGGTGCTCTTCTACCGCAACCTGCGGAAGCTCAAGTACCTGACCAAGTTCCACCCGTTCCACGGCGCGTTC
CGCGACCACGCCGCCCGCGGCTCCCTCCCAAACTACGCCGTGGTGGAGCAGCACTACATGGACTCCAAGTCCCACCCGGC
CAACGACGACCACCCGTCGCACGACGTCTTCCAGGGCCAGATGCTCGTCAAGGAGGTGTACGAGACGCTCCGCGCCAGCC
CGCAGTGGAACCAGACGCTCATGGTCGTCACCTACGACGAGCACGGCGGCTTCTACGACCATGTCCCCACCCCCGTCACC
GGCGTCCCCAGCCCCGACGGCATCGTCGGCCCGCCGCCGTATAACTTCGCCTTTGATCGCCTCGGCGTCCGTGTCCCAGC
CATCGTCATCTCCCCCTGGATCAACAAGGGTACAGTTGTTCATGGGCCAAACGGGAGCCCAACCGCGACGTCGGAGTACG
AGCACTCGTCCATCCCCGCGACCGTGAAGAAACTCTTCGATCTGCCACAGGATTTCCTGACTAAAAGGGACGCCTGGGCT
GGAACGTTTGAGAGTGTCGTGCAAGGCAGAACTGAGCCAAGGACGGATTGCCCAGAGCAACTCCCAATGCCGATGAGGAT
ACGGCTGACGGAGGCGAACGAGGAGGCGAAGCTGAGTGAGTTCCAGCAGGAGCTGGTTCAGCTGGCGTCGGTGCTCAACG
GGGACCACCAGCTGAGCAGCCTGCAGGACACGATCAGGGACAGGATGAACGTCAGGGAAGGCATCGCGTACATGCGGGGC
GCTGTAAAGCGCTTCTTCGAGACCGGCATGTCAGCCAAGAGGATGGGCGTCGACGACGAGCAGATCGTCAAGATGAGGCC
ATCGCTCACCACCAGGACATCCCCTGCGATCGAGCAACCATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA000088 | ortholog_one2one | 1 retrogene | |
| Brachypodium distachyon | BRADI2G61140 | ortholog_one2one | 1 retrogene | |
| Leersia perrieri | LPERR01G38640 | ortholog_one2many | 1 retrogene | |
| Oryza barthii | OBART01G44250 | ortholog_one2one | 2 retrogenes | |
| Oryza glumaepatula | OGLUM01G48550 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA01G50380 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0381200 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oruf_3 | 67.73 | 65.96 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_oruf_32 | 55.66 | 78.27 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ORUFI01G47680 retrocopies