Parental gene:

ORUFI07G00430

Aliases:None
Description:None
Organism:Brownbeard rice (Oryza rufipogon)
Coordinates:7:288931..293039(-)


>ORUFI07G00430
ATGGCCGGCGGCGCGGTGGTGAGCACGGGGGCAGGCAAGGACTACCCTGGCAAGCTCACCCTCTTCGTCTTCTTCACATG
CGTCGTCGCCGCCACCGGTGGTCTCATCTTCGGATATGACATCGGTATATCAGGTGGTGTGACGTCCATGGACCCGTTCC
TGAGGAAGTTCTTCCCGGAGGTGTATCGGAAGAAGCAGATGGCGGACAAGAACAACCAGTACTGCAAGTACGACAACCAG
CTGCTGCAGACCTTCACCTCGTCGCTCTACCTCGCCGCCCTCGTCTCCTCCTTCTTCGCCGCCACCGTCACCCGCGTCCT
CGGCCGCAAGTGGTCCATGTTCGCCGGCGGCCTCACCTTCCTCATCGGCGCCGCCCTCAACGGCGCCGCCGAGAACGTCG
CCATGCTCATCGTCGGTCGTATCCTCCTCGGTGTCGGCGTCGGCTTCGCCAATCAGTCGGTGCCGGTGTACTTGTCGGAG
ATGGCGCCGGCTCGGCTGCGGGGGATGCTGAACATCGGGTTCCAGCTGATGATCACCATCGGCATCCTGGCGGCGGAGCT
GATAAACTACGGGACGGCGAAGATCAAGGCCGGGTGGGGATGGCGGGTGAGCCTGGCGCTGGCCGCCGTCCCCGCCGCCA
TCATCACCCTCGGCTCCCTCTTCCTCCCGGACACCCCCAACTCGCTCATCGACAGGGGCCACCCGGAGGCGGCGGAGCGC
ATGCTCCGGCGCATCCGCGGCTCCGACGTGGACGTGTCGGAGGAGTACGCGGACCTGGTGGCGGCGAGCGAGGAGTCGAA
GCTGGTGCAGCACCCGTGGCGCAACATCCTCCGCCGCAAGTACCGCGCCCAGCTCACCATGGCCATCTGCATCCCCTTCT
TCCAGCAGCTCACCGGGATCAACGTCATCATGTTCTACGCCCCAGTGCTGTTCGACACCCTGGGCTTCAAGAGCGACGCG
TCGCTCATGTCCGCCGTCATCACGGGCCTCGTCAACGTCTTCGCCACGCTGGTGTCCATCTTCACCGTGGACCGCCTCGG
CCGCCGCAAGCTGTTCCTGCAGGGCGGGGCGCAGATGGTGGTGTGCCAGGTGGTGGTGGGGACGCTGATCGCCGTCAAGT
TCGGGACGAGCGGCATCGGCGACATCCCCAAGGGGTACGCGGCGGTGGTGGTGCTCTTCATCTGCATGTACGTGGCAGGG
TTCGCGTGGTCGTGGGGCCCACTGGGGTGGCTCGTCCCCAGCGAGATCTTCCCGCTGGAGATCCGGCCCGCGGGGCAGAG
CATCAACGTGTCGGTGAACATGCTCTTCACCTTCGTCATCGCGCAGGCCTTCCTCACCATGCTCTGCCACATGAAGTTCG
GCCTCTTCTACTTCTTCGCCGGATGGGTCGTCATCATGACCGTCTTCATCGCCCTCTTCCTCCCCGAGACCAAGAACGTC
CCCATCGAGGAGATGGTGCTCGTCTGGAAGTCCCACTGGTTCTGGCGCCGATTCATCGGAGACCACGACGTCCACGTCGG
CGCCAACCACGTCTCCAACAATAAGCTCCAACCATAA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA024972 ortholog_one2one 1 retrogene
retro_oind_19,
Medicago truncatula MTR_0009s0370 ortholog_many2many 1 retrogene
retro_mtru_23,
Oryza barthii OBART07G00410 ortholog_one2one 1 retrogene
retro_obar_21,
Oryza glumaepatula OGLUM07G00430 ortholog_one2one 1 retrogene
retro_oglu_47,
Oryza rufipogon ORUFI07G19310 within_species_paralog 1 retrogene
retro_oruf_45,
Oryza sativa japonica OS07G0106200 ortholog_one2one 1 retrogene
retro_osat_43,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oruf_37 73.41 97.30
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Download FASTA sequences of all ORUFI07G00430 retrocopies