Parental gene: | OS01G0543100 |
| Aliases: | None |
| Description: | Os01g0543100 protein; cDNA clone:001-119-E09, full insert sequence [Source:UniProtKB/TrEMBL;Acc:Q0JM38] |
| Organism: | Rice subsp. japonica (Oryza sativa japonica) |
| Coordinates: | 1:20061960..20066455(+) |
>OS01G0543100
ATGAGTGCAGCAATGGCTGCCTTTGCCTTCCTACTAGTCATCGCCATCGTCTTCCCCCTCGCATCCGCATTCCCTTCCCC
TCCTGTTTCATGGGGCCAACAGCAGCTAGACCCTCACTTCTACGACCACTCGTGCCCACAAGCACAGCAAATCGTGGCAT
CTATCGTCGGGAAAGCGCATTACCAGGACCCCCGCATGGCCGCATCCCTCCTCCGTCTCCACTTCCACGACTGCTTTGTC
AAGGGCTGCGACGCGTCGATCCTACTAGACAGCAGTGCGACGATCATGAGCGAGAAGCGGTCGAACCCTAACCGGGACTC
TGCGAGGGGGTTCGAGGTGATCGACGAAATCAAGGCGGCGTTGGAGGCCGCTTGCCCACACACCGTCTCTTGCGCTGACA
TCCTTGCCCTCGCCGCGCGTGACTCCACCGTCATGACGGGAGGCCCCGGGTGGATAGTGCCGCTGGGGAGGAGGGACTCG
CGTGGGGCGAGCGTGCAGGGCTCCAACAACGACATCCCGGCTCCCAACAACACCCTCCCCACCATCATCACCAAGTTCAA
GCTCCAGGGCCTCGACATCGTCGACCTCGTCGCCCTCCTCGGTAGCCACACCATCGGCGACTCCCGGTGCACGAGCTTCC
GGCAGCGGCTGTACAACCAGACGGGGAACGGCCTGCCGGACTTCACGCTGGACGCGTCGTACGCGGCGGCGCTGCGGCCG
CGGTGCCCGCGCTCCGGCGGCGACCAGAACCTCTTCTTCCTCGACCCCGTCACCCCCTTCAGGTTCGACAACCAGTACTA
CAAGAACCTGCTCGCCCACCGCGGCCTCCTCAGCTCCGACGAGGTGCTCCTCACCGGCGGCAACCCGGCCACGGCGGAGC
TCGTCGAGCTCTACGCCGCCGATCAGGACATCTTCTTCGCCCACTTCGCGCGGTCCATGGTCAAGATGGGCAACATCTCG
CCGCTCACCGGCGGCAACGGCGAGGTCAGGACCAACTGCAGGAGGGTCAACCACAACTACTGA
ATGAGTGCAGCAATGGCTGCCTTTGCCTTCCTACTAGTCATCGCCATCGTCTTCCCCCTCGCATCCGCATTCCCTTCCCC
TCCTGTTTCATGGGGCCAACAGCAGCTAGACCCTCACTTCTACGACCACTCGTGCCCACAAGCACAGCAAATCGTGGCAT
CTATCGTCGGGAAAGCGCATTACCAGGACCCCCGCATGGCCGCATCCCTCCTCCGTCTCCACTTCCACGACTGCTTTGTC
AAGGGCTGCGACGCGTCGATCCTACTAGACAGCAGTGCGACGATCATGAGCGAGAAGCGGTCGAACCCTAACCGGGACTC
TGCGAGGGGGTTCGAGGTGATCGACGAAATCAAGGCGGCGTTGGAGGCCGCTTGCCCACACACCGTCTCTTGCGCTGACA
TCCTTGCCCTCGCCGCGCGTGACTCCACCGTCATGACGGGAGGCCCCGGGTGGATAGTGCCGCTGGGGAGGAGGGACTCG
CGTGGGGCGAGCGTGCAGGGCTCCAACAACGACATCCCGGCTCCCAACAACACCCTCCCCACCATCATCACCAAGTTCAA
GCTCCAGGGCCTCGACATCGTCGACCTCGTCGCCCTCCTCGGTAGCCACACCATCGGCGACTCCCGGTGCACGAGCTTCC
GGCAGCGGCTGTACAACCAGACGGGGAACGGCCTGCCGGACTTCACGCTGGACGCGTCGTACGCGGCGGCGCTGCGGCCG
CGGTGCCCGCGCTCCGGCGGCGACCAGAACCTCTTCTTCCTCGACCCCGTCACCCCCTTCAGGTTCGACAACCAGTACTA
CAAGAACCTGCTCGCCCACCGCGGCCTCCTCAGCTCCGACGAGGTGCTCCTCACCGGCGGCAACCCGGCCACGGCGGAGC
TCGTCGAGCTCTACGCCGCCGATCAGGACATCTTCTTCGCCCACTTCGCGCGGTCCATGGTCAAGATGGGCAACATCTCG
CCGCTCACCGGCGGCAACGGCGAGGTCAGGACCAACTGCAGGAGGGTCAACCACAACTACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA003712 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB01G28610 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0205900 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_osat_3 | 71.24 | 89.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OS01G0543100 retrocopies