Parental gene: | PGSC0003DMG400005011 |
| Aliases: | None |
| Description: | Crooked neck protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005011] |
| Organism: | Potato (Solanum tuberosum) |
| Coordinates: | 12:53748748..53757005(+) |
>PGSC0003DMG400005011
ATGGGTTCCAGAGATGCAGACCCAAGTCTAGGTTATCTCACTCGCAAGGAAACGGAGGTAAAGCTTCCTAGACCTACGCG
GGTGAAGAACAAAACCCCAGCTCCAATCCAAATCACCGCCGAGCAAATCCTCCGGGAAGCTAGGGAACGTCAAGAGGCTG
AAATCAGACCACCAAAGCAGAAAATCACTGACCCAACAGAGCTTGCCGATTACCGTCTTCGCAAGAGAAAGGAATTCGAG
GCGTTGATTAGCCGTGTACGGTGGAACAAGAGTGTGTGGGTGAAATATGCTAAGTGGGAAGAATCACAAAAGGATTTCAA
ACGTGCTCGTTCTATATGGGAGCGTGCACTTGAAGTGGATTACCGTGACCATACCATGTGGTTGAAGTATGCTGATGTGG
AGATGAAGAATAAGTTTGTTAATCATGCTCGTAATGTATGGGATCGAGCTGTTACTCTTTTGCCTAGGGTTGATCAGTTG
TGGTACAAGTATATTCATATGGAGGAGATGTTAGGCAATGTGGCTGGTGCTAGACAGATTTTTGAGAGGTGGATGGGTTG
GATGCCTGATCAGCAAGGGTGGTTGTCTTATATTAAGTTTGAGTTAAGGTATAATGAAATAGAGAGGGCAAGAGCGATTT
TCGAGAGATTTGTGCAGTGTCATCCGAAAGTTAGTGCTTGGATTAGGTTTGCGAAATTTGAGATGAAGAATGGGGAGATA
GGAAGGGCGAGGAATTGTTATGAGAGGGCTGTGGATAAGTTGGCAGATGATGAGGAAGCTGAGCAGTTGTTTGTGGCATT
TGCTGAGTTTGAGGAGAAGTGTAAGGAGGCGGAGAGGGCAAGGTGCATATATAAGTTTGCACTTGATCACATACCGAAAG
GGCGAGCTGAAGATTTGTACAGGAAGTTTGTGGCATTTGAAAAGCAGTATGGTGATAGAGAAGGTATTGAGGATGCTATA
GTTGGAAAAAGGAGGTTTCAGTATGAGGATGAAGTAAGGAAGAATCCACGTAACTATGACACGTGGTTTGATTATATTCG
GCTGGAAGAGAGCGTTGGAAATAAAGAGAGGATTAGAGAGGTTTATGAGAGAGCCATTGCTAATGTTCCTCCTGCTGAAG
AGAAGCGATATTGGCAGCGATACATTTACTTATGGATTAATTATGCATTATATGAAGAGCTTGATGCAGAAGACATGGAA
AGGACCAGAGATGTCTACAGGGAGTGTCTTAAGCTGATTCCGCATCAGAAGTTTTCATTTGCAAAGATTTGGTTGTTGGC
TGCCCAGTTTGAGATTCGGCAGTTAAGACTCAAGGAGGCGCGACTTCTACTTGGAGAAGCAATTGGAAGGGCTCCTAAAG
ACAAGATATTTAAGAAGTACATAGAGATAGAGCTGCATTTTGGAAACATAGATCGTTGCAGAAAGCTTTATGAGAAGTAC
TTGGAGTGGTCTCCAGAAAATTGCTATGCTTGGAGCAAATTCGCCGAGTTGGAGAGGTCCTTGTATGAAACAGATAGAGC
CAGGGCTATTTTTGAGCTTGCAATTGACCAACCTGCTCTGGATATGCCAGAGTTACTATGGAAGGCTTACATCGACTTTG
AGATCTCTGAGGGTGAATTTGAAAGAACTAGAGCACTATATGAAAGACTTCTTAACCGCACAAAACACTTGAAGGTGTGG
ATAAGTTATGCGAAGTTTGAGGCTTCGGCTATGGATCCAGAGGCTGAGGAAGATATTGAACTGAAAAAGAACTGCCTGCA
ACGTGCCAGAGATGTTTTTGAGAGGGCAGTTTCTTACTTCAGAAATTCAGCACCCGAACTAAAAGAAGAAAGAGCAATGC
TTCTCGAAGAGTGGCTAAATATGGAAAGTGGTTTTGCTGAGCTTGGGGATGTCAGTTTAGTCCGTGCTAAACTACCAAAG
AAACTCAAGAAGAGAAGGCAAATAGACATGGAGGATGGCCCAGCAGCTTATGAGGAGTACATAGACTATCTTTTCCCAGA
GGAAACACAGACCACAAATCTCAAAATCTTGGAAGCTGCTTACAAATGGAAGAAGCAGCGAGTTGCATCTGAGGAGGATT
AG
ATGGGTTCCAGAGATGCAGACCCAAGTCTAGGTTATCTCACTCGCAAGGAAACGGAGGTAAAGCTTCCTAGACCTACGCG
GGTGAAGAACAAAACCCCAGCTCCAATCCAAATCACCGCCGAGCAAATCCTCCGGGAAGCTAGGGAACGTCAAGAGGCTG
AAATCAGACCACCAAAGCAGAAAATCACTGACCCAACAGAGCTTGCCGATTACCGTCTTCGCAAGAGAAAGGAATTCGAG
GCGTTGATTAGCCGTGTACGGTGGAACAAGAGTGTGTGGGTGAAATATGCTAAGTGGGAAGAATCACAAAAGGATTTCAA
ACGTGCTCGTTCTATATGGGAGCGTGCACTTGAAGTGGATTACCGTGACCATACCATGTGGTTGAAGTATGCTGATGTGG
AGATGAAGAATAAGTTTGTTAATCATGCTCGTAATGTATGGGATCGAGCTGTTACTCTTTTGCCTAGGGTTGATCAGTTG
TGGTACAAGTATATTCATATGGAGGAGATGTTAGGCAATGTGGCTGGTGCTAGACAGATTTTTGAGAGGTGGATGGGTTG
GATGCCTGATCAGCAAGGGTGGTTGTCTTATATTAAGTTTGAGTTAAGGTATAATGAAATAGAGAGGGCAAGAGCGATTT
TCGAGAGATTTGTGCAGTGTCATCCGAAAGTTAGTGCTTGGATTAGGTTTGCGAAATTTGAGATGAAGAATGGGGAGATA
GGAAGGGCGAGGAATTGTTATGAGAGGGCTGTGGATAAGTTGGCAGATGATGAGGAAGCTGAGCAGTTGTTTGTGGCATT
TGCTGAGTTTGAGGAGAAGTGTAAGGAGGCGGAGAGGGCAAGGTGCATATATAAGTTTGCACTTGATCACATACCGAAAG
GGCGAGCTGAAGATTTGTACAGGAAGTTTGTGGCATTTGAAAAGCAGTATGGTGATAGAGAAGGTATTGAGGATGCTATA
GTTGGAAAAAGGAGGTTTCAGTATGAGGATGAAGTAAGGAAGAATCCACGTAACTATGACACGTGGTTTGATTATATTCG
GCTGGAAGAGAGCGTTGGAAATAAAGAGAGGATTAGAGAGGTTTATGAGAGAGCCATTGCTAATGTTCCTCCTGCTGAAG
AGAAGCGATATTGGCAGCGATACATTTACTTATGGATTAATTATGCATTATATGAAGAGCTTGATGCAGAAGACATGGAA
AGGACCAGAGATGTCTACAGGGAGTGTCTTAAGCTGATTCCGCATCAGAAGTTTTCATTTGCAAAGATTTGGTTGTTGGC
TGCCCAGTTTGAGATTCGGCAGTTAAGACTCAAGGAGGCGCGACTTCTACTTGGAGAAGCAATTGGAAGGGCTCCTAAAG
ACAAGATATTTAAGAAGTACATAGAGATAGAGCTGCATTTTGGAAACATAGATCGTTGCAGAAAGCTTTATGAGAAGTAC
TTGGAGTGGTCTCCAGAAAATTGCTATGCTTGGAGCAAATTCGCCGAGTTGGAGAGGTCCTTGTATGAAACAGATAGAGC
CAGGGCTATTTTTGAGCTTGCAATTGACCAACCTGCTCTGGATATGCCAGAGTTACTATGGAAGGCTTACATCGACTTTG
AGATCTCTGAGGGTGAATTTGAAAGAACTAGAGCACTATATGAAAGACTTCTTAACCGCACAAAACACTTGAAGGTGTGG
ATAAGTTATGCGAAGTTTGAGGCTTCGGCTATGGATCCAGAGGCTGAGGAAGATATTGAACTGAAAAAGAACTGCCTGCA
ACGTGCCAGAGATGTTTTTGAGAGGGCAGTTTCTTACTTCAGAAATTCAGCACCCGAACTAAAAGAAGAAAGAGCAATGC
TTCTCGAAGAGTGGCTAAATATGGAAAGTGGTTTTGCTGAGCTTGGGGATGTCAGTTTAGTCCGTGCTAAACTACCAAAG
AAACTCAAGAAGAGAAGGCAAATAGACATGGAGGATGGCCCAGCAGCTTATGAGGAGTACATAGACTATCTTTTCCCAGA
GGAAACACAGACCACAAATCTCAAAATCTTGGAAGCTGCTTACAAATGGAAGAAGCAGCGAGTTGCATCTGAGGAGGATT
AG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Triticum aestivum | Traes_7DL_41F6E8FC4 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_stub_23 | 88.64 | 96.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_stub_36 | 89.67 | 79.22 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all PGSC0003DMG400005011 retrocopies