Parental gene: | PGSC0003DMG400029389 |
| Aliases: | None |
| Description: | Serine hydroxymethyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400029389] |
| Organism: | Potato (Solanum tuberosum) |
| Coordinates: | 12:57744785..57749676(+) |
>PGSC0003DMG400029389
ATGGAGGCTTGTAGCAGAGCTGCAGTGATGGGTTCTTCTCTTCAGCAACCTGTTTGGGTTAATGGATCAGCTTTTCCTTT
AAAGGGTGAAGTGAAACTTAATGGGGTCAAGTTATGGTCTGTTAAGCCTTGCAAAGCCTCTCAACTTGAAGGGAGCTTGG
TTTCAGGAAGGCCTCCTTCAGTTTCTGTTCCTATTCCAGAAATGGGAGGTGCTGGGAACAACTTTGCAGATTATGGATTG
GGTGAAGCTGATCCTGAAGTTCGTGGTATAATTGACAAAGAGAAGGAACGTCAATTTCGGAGTTTAGAGCTTATTGCCTC
TGAGAATTTCACATCTCGAGCAGTGATGGAGGCAGTGGGTTCTTGCCTTACAAATAAATACTCCGAAGGACTACCAGGCA
AAAGATATTATGGTGGAAACGAGCACATTGATGAGTTAGAAATACTCTGTCAAGAGAGGGCTTTGGCAGCCTTTAACTTA
GATGGAAAACAGTGGGGTGTCAATGTTCAACCCCTATCTGGTTCTCCAGCAAATTTTGAAGTCTACACAGCAGTTCTCAA
TCCACATGACCGAATTATGGGATTGGACTTGCCTCATGGGGGTCATTTGTCCCATGGATTTATGACTCCTAAAAGACGAG
TTTCAGGCACATCTATTTACTTTGAGTCCATGCCTTACCGCCTTGATGAATCTTCAGGCCTTGTTGATTATGACATGCTT
GAGAAAACTGCAACCCTTTTTCGGCCAAAACTTATTATTGCTGGTGCTAGTGCATATCCACGAGATTTTGATTATCCTCG
TATGAGAAAGATAGCAGATGCTGTTGGAGCCTTTCTCATGATGGATATGGCTCACATCAGTGGGCTTGTTGCCGCCTCTG
TAGTTGCTAATCCATTTGAATACTGTGACATTGTTACCACAACAACTCACAAGTCTCTAAGAGGTCCTAGAGGAGGAATG
ATCTTCTTCAAGAAAGATCCTGTCCTAGGCGTTGATTTGGAATCTGCCATCAATAATGCTGTTTTTCCTGGCTTGCAGGG
TGGTCCACATAATCACACAATTGGAGGACTAGCTGTTTGCTTGAAGCATGCCAAATCACCTGATTTCAAGGCTTATCAGA
ACAAGGTGGTCTCTAACTGTAGAGCTCTTGCAAGCCGGTTAATGGAGTTGGGGTACAAACTGGTCTCTGGAGGAACTGAC
AATCATTTGGTCCTAGTTGATCTCAGGCCATTGGGTACTGATGGTGCTAGAGTGGAGAAAATACTTGACATGGCATCAAT
CACGCTCAATAAGAATTCAGTAGCCGGTGATAAAAGTGCACTAGTGCCTGGTGGTATACGCATAGGCTCACCTGCAATGA
CAACTCGAGGTTTCTCAGAGAAGGAGTTTGTAACCATTGCAGACCTCATTAACGAGGGTGTGCAGATAACTATTGAGGCC
AAGAGCTTAGTCTCTGGTTCTAAACTCCAAGACTTCATGAAATTTGTTACTTCACCGGAGTTTCCTTTGATCGATAAGGT
GTTAGATCTGCAAAGAAGAGTTGAAGCTTTGACAATCCAATATCCATTGCCCGGCTTGTGA
ATGGAGGCTTGTAGCAGAGCTGCAGTGATGGGTTCTTCTCTTCAGCAACCTGTTTGGGTTAATGGATCAGCTTTTCCTTT
AAAGGGTGAAGTGAAACTTAATGGGGTCAAGTTATGGTCTGTTAAGCCTTGCAAAGCCTCTCAACTTGAAGGGAGCTTGG
TTTCAGGAAGGCCTCCTTCAGTTTCTGTTCCTATTCCAGAAATGGGAGGTGCTGGGAACAACTTTGCAGATTATGGATTG
GGTGAAGCTGATCCTGAAGTTCGTGGTATAATTGACAAAGAGAAGGAACGTCAATTTCGGAGTTTAGAGCTTATTGCCTC
TGAGAATTTCACATCTCGAGCAGTGATGGAGGCAGTGGGTTCTTGCCTTACAAATAAATACTCCGAAGGACTACCAGGCA
AAAGATATTATGGTGGAAACGAGCACATTGATGAGTTAGAAATACTCTGTCAAGAGAGGGCTTTGGCAGCCTTTAACTTA
GATGGAAAACAGTGGGGTGTCAATGTTCAACCCCTATCTGGTTCTCCAGCAAATTTTGAAGTCTACACAGCAGTTCTCAA
TCCACATGACCGAATTATGGGATTGGACTTGCCTCATGGGGGTCATTTGTCCCATGGATTTATGACTCCTAAAAGACGAG
TTTCAGGCACATCTATTTACTTTGAGTCCATGCCTTACCGCCTTGATGAATCTTCAGGCCTTGTTGATTATGACATGCTT
GAGAAAACTGCAACCCTTTTTCGGCCAAAACTTATTATTGCTGGTGCTAGTGCATATCCACGAGATTTTGATTATCCTCG
TATGAGAAAGATAGCAGATGCTGTTGGAGCCTTTCTCATGATGGATATGGCTCACATCAGTGGGCTTGTTGCCGCCTCTG
TAGTTGCTAATCCATTTGAATACTGTGACATTGTTACCACAACAACTCACAAGTCTCTAAGAGGTCCTAGAGGAGGAATG
ATCTTCTTCAAGAAAGATCCTGTCCTAGGCGTTGATTTGGAATCTGCCATCAATAATGCTGTTTTTCCTGGCTTGCAGGG
TGGTCCACATAATCACACAATTGGAGGACTAGCTGTTTGCTTGAAGCATGCCAAATCACCTGATTTCAAGGCTTATCAGA
ACAAGGTGGTCTCTAACTGTAGAGCTCTTGCAAGCCGGTTAATGGAGTTGGGGTACAAACTGGTCTCTGGAGGAACTGAC
AATCATTTGGTCCTAGTTGATCTCAGGCCATTGGGTACTGATGGTGCTAGAGTGGAGAAAATACTTGACATGGCATCAAT
CACGCTCAATAAGAATTCAGTAGCCGGTGATAAAAGTGCACTAGTGCCTGGTGGTATACGCATAGGCTCACCTGCAATGA
CAACTCGAGGTTTCTCAGAGAAGGAGTTTGTAACCATTGCAGACCTCATTAACGAGGGTGTGCAGATAACTATTGAGGCC
AAGAGCTTAGTCTCTGGTTCTAAACTCCAAGACTTCATGAAATTTGTTACTTCACCGGAGTTTCCTTTGATCGATAAGGT
GTTAGATCTGCAAAGAAGAGTTGAAGCTTTGACAATCCAATATCCATTGCCCGGCTTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Vitis vinifera | VIT_04s0008g00770 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_stub_40 | 92.57 | 56.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all PGSC0003DMG400029389 retrocopies