Parental gene: | PRUPE_ppa001552mg |
| Aliases: | None |
| Description: | None |
| Organism: | Peach (Prunus persica) |
| Coordinates: | scaffold_6:7656352..7662094(-) |
>PRUPE_ppa001552mg
ATGGCTCACCCAGCCGAATCGTCCGACTCGAAGAAGAAGGACTTCTCGACCGCGATTTTGGAGCGGAAGAAGTCGCCGAA
CCGTCTCGTCGTGGATGAGGCTATAAACGATGACAACTCTGTCGTTTCGATGCATCCAGAGACCATGGAAAAGCTCCAGC
TTTTCCGTGGCGACACTATCCTCATCAAGGGGAAGAAACGGAAGGACACAATCTGCATTGCACTTGCTGATGACACCTGT
GAAGAGCCAAGAATCAGGATGAACAAGGTTGTCAGATCGAATTTGAGGGTTCGACTTGGAGATGTTGTGTCTGTACACCA
ATGCCCTGATGTGAAGTATGGGAAACGTGTTCACATTCTGCCTATTGATGACTCCATAGAAGGAGTTACTGGAAATCTCT
TTGATGCCTTTTTGAAACCTTACTTCTTGGAAGCTTATCGCCCTGTGAGGAAAGGAGATCTGTTCCTTGTCAGAGGAGGA
ATGAGAAGTGTAGAGTTCAAGGTTATTGAAACAGACCCAGGAGAATATTGTGTGGTTGCCCCAGACACTGAGATCTTCTG
TGAGGGGGAACCAGTGAAAAGGGAGGATGAGGAAAGGTTGGATGAAGTTGGTTATGATGATGTGGGTGGTGTTCGGAAGC
AGATGGCTCAAATCCGTGAGTTAGTTGAGCTGCCACTGAGGCATCCTCAACTGTTTAAATCTATTGGTGTGAAACCACCA
AAAGGAATTCTACTTTATGGACCCCCGGGTTCAGGAAAGACATTAATAGCCAGAGCTGTTGCCAATGAAACTGGTGCTTT
TTTCTTTTGCATTAATGGGCCAGAGATTATGTCTAAATTGGCTGGAGAGAGTGAGAGCAATCTCAGAAAGGCATTTGAAG
AAGCGGAGAAGAATGCCCCATCAATCATCTTTATTGATGAGCTTGATTCAATTGCTCCTAAGAGGGAGAAGACACACGGT
GAGGTCGAAAGGCGGATTGTTTCTCAACTTTTGACTCTGATGGACGGATTGAAATCTAGAGCTCACGTTATTGTTATTGG
TGCTACAAATCGTCCAAACAGTATTGACTCGGCTTTGAGAAGGTTTGGTAGGTTTGATAGGGAGATAGACATTGGTGTTC
CTGATGAAGTTGGGCGTCTTGAAGTTCTTCGCATTCACACCAAGAACATGAAACTCTCTGATGATGTTGATTTAGAGAGG
ATTTCCAAAGATACACATGGGTATGTTGGTGCTGACCTTGCTGCTCTCTGCACTGAAGCTGCACTCCAATGCATTAGGGA
GAAGATGGATGTGATTGACTTGGAAGATGAAACCATTGATGCAGAGATACTCAACTCAATGGCTGTAACAAATGAGCACT
TCCAGACTGCTCTAGGAACAAGCAATCCATCTGCTTTGCGCGAAACGGTTGTTGAAGTTCCCAATGTTAGTTGGGAGGAT
ATTGGAGGCCTTGAAAATGTCAAGCGGGAGCTACAAGAGACTGTTCAATATCCTGTTGAGCACCCAGAGAAGTTTGAGAA
ATTTGGCATGTCACCTTCTAAAGGGGTCCTTTTCTATGGACCCCCAGGATGTGGGAAAACTCTTTTGGCCAAGGCAATCG
CAAATGAATGTCAAGCTAACTTCATCAGTATCAAAGGCCCTGAACTACTCACCATGTGGTTTGGTGAGAGTGAAGCCAAT
GTTCGAGAAATCTTTGACAAGGCTCGTGCATCTGCACCATGTGTCCTTTTCTTTGATGAGCTTGATTCCATTGCTACACA
GAGAGGAAGCAGTTCTGGGGATGCAGGGGGTGCTGCTGATCGGGTTCTTAACCAACTCCTGACTGAAATGGATGGCATGA
CAGCAAAAAAGACGGTTTTCATTATTGGGGCCACAAACCGACCTGACATCATTGACCCAGCACTTCTCCGACCTGGCCGT
CTTGATCAATTGATTTATATTCCTCTTCCTGATGAAGAATCGCGTTTCCAAATCTTTAAATCCTGCTTGAGAAAATCACC
TGTCTCAAAAGATGTTGATTTGAGAGCATTGGCCAGGTATACACAGGGCTTCAGTGGGGCTGATATCACAGAGATCTGCC
AGCGGTCCTGCAAGTATGCCATAAGAGAAAATATTGAGAAGGATATAGAGCGGGAGAGGAGGAGAGGGGAGAATCCGGAT
TCTATGGATGAGGACATCGATGACGAAGTGGCAGAGATTAAAGCTGCTCATTTTGAGGAGTCAATGAAATATGCTCGTAG
GAGTGTCAGCGATGCAGATATTCGCAAATATCAGACCTTTGCTCAGACCTTGCAGCAGTCCAGGGGTTTCGGAACTGAGT
TTAGGTTTGCTGATAACCAAACTGGGGCAACTGGTGCTGATCCATTCGCAACTTCTGCTGGTGGGGCTGACGAAGATGAT
TTGTATAGTTAA
ATGGCTCACCCAGCCGAATCGTCCGACTCGAAGAAGAAGGACTTCTCGACCGCGATTTTGGAGCGGAAGAAGTCGCCGAA
CCGTCTCGTCGTGGATGAGGCTATAAACGATGACAACTCTGTCGTTTCGATGCATCCAGAGACCATGGAAAAGCTCCAGC
TTTTCCGTGGCGACACTATCCTCATCAAGGGGAAGAAACGGAAGGACACAATCTGCATTGCACTTGCTGATGACACCTGT
GAAGAGCCAAGAATCAGGATGAACAAGGTTGTCAGATCGAATTTGAGGGTTCGACTTGGAGATGTTGTGTCTGTACACCA
ATGCCCTGATGTGAAGTATGGGAAACGTGTTCACATTCTGCCTATTGATGACTCCATAGAAGGAGTTACTGGAAATCTCT
TTGATGCCTTTTTGAAACCTTACTTCTTGGAAGCTTATCGCCCTGTGAGGAAAGGAGATCTGTTCCTTGTCAGAGGAGGA
ATGAGAAGTGTAGAGTTCAAGGTTATTGAAACAGACCCAGGAGAATATTGTGTGGTTGCCCCAGACACTGAGATCTTCTG
TGAGGGGGAACCAGTGAAAAGGGAGGATGAGGAAAGGTTGGATGAAGTTGGTTATGATGATGTGGGTGGTGTTCGGAAGC
AGATGGCTCAAATCCGTGAGTTAGTTGAGCTGCCACTGAGGCATCCTCAACTGTTTAAATCTATTGGTGTGAAACCACCA
AAAGGAATTCTACTTTATGGACCCCCGGGTTCAGGAAAGACATTAATAGCCAGAGCTGTTGCCAATGAAACTGGTGCTTT
TTTCTTTTGCATTAATGGGCCAGAGATTATGTCTAAATTGGCTGGAGAGAGTGAGAGCAATCTCAGAAAGGCATTTGAAG
AAGCGGAGAAGAATGCCCCATCAATCATCTTTATTGATGAGCTTGATTCAATTGCTCCTAAGAGGGAGAAGACACACGGT
GAGGTCGAAAGGCGGATTGTTTCTCAACTTTTGACTCTGATGGACGGATTGAAATCTAGAGCTCACGTTATTGTTATTGG
TGCTACAAATCGTCCAAACAGTATTGACTCGGCTTTGAGAAGGTTTGGTAGGTTTGATAGGGAGATAGACATTGGTGTTC
CTGATGAAGTTGGGCGTCTTGAAGTTCTTCGCATTCACACCAAGAACATGAAACTCTCTGATGATGTTGATTTAGAGAGG
ATTTCCAAAGATACACATGGGTATGTTGGTGCTGACCTTGCTGCTCTCTGCACTGAAGCTGCACTCCAATGCATTAGGGA
GAAGATGGATGTGATTGACTTGGAAGATGAAACCATTGATGCAGAGATACTCAACTCAATGGCTGTAACAAATGAGCACT
TCCAGACTGCTCTAGGAACAAGCAATCCATCTGCTTTGCGCGAAACGGTTGTTGAAGTTCCCAATGTTAGTTGGGAGGAT
ATTGGAGGCCTTGAAAATGTCAAGCGGGAGCTACAAGAGACTGTTCAATATCCTGTTGAGCACCCAGAGAAGTTTGAGAA
ATTTGGCATGTCACCTTCTAAAGGGGTCCTTTTCTATGGACCCCCAGGATGTGGGAAAACTCTTTTGGCCAAGGCAATCG
CAAATGAATGTCAAGCTAACTTCATCAGTATCAAAGGCCCTGAACTACTCACCATGTGGTTTGGTGAGAGTGAAGCCAAT
GTTCGAGAAATCTTTGACAAGGCTCGTGCATCTGCACCATGTGTCCTTTTCTTTGATGAGCTTGATTCCATTGCTACACA
GAGAGGAAGCAGTTCTGGGGATGCAGGGGGTGCTGCTGATCGGGTTCTTAACCAACTCCTGACTGAAATGGATGGCATGA
CAGCAAAAAAGACGGTTTTCATTATTGGGGCCACAAACCGACCTGACATCATTGACCCAGCACTTCTCCGACCTGGCCGT
CTTGATCAATTGATTTATATTCCTCTTCCTGATGAAGAATCGCGTTTCCAAATCTTTAAATCCTGCTTGAGAAAATCACC
TGTCTCAAAAGATGTTGATTTGAGAGCATTGGCCAGGTATACACAGGGCTTCAGTGGGGCTGATATCACAGAGATCTGCC
AGCGGTCCTGCAAGTATGCCATAAGAGAAAATATTGAGAAGGATATAGAGCGGGAGAGGAGGAGAGGGGAGAATCCGGAT
TCTATGGATGAGGACATCGATGACGAAGTGGCAGAGATTAAAGCTGCTCATTTTGAGGAGTCAATGAAATATGCTCGTAG
GAGTGTCAGCGATGCAGATATTCGCAAATATCAGACCTTTGCTCAGACCTTGCAGCAGTCCAGGGGTTTCGGAACTGAGT
TTAGGTTTGCTGATAACCAAACTGGGGCAACTGGTGCTGATCCATTCGCAACTTCTGCTGGTGGGGCTGACGAAGATGAT
TTGTATAGTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Populus trichocarpa | POPTR_0006s12740 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pper_43 | 88.54 | 99.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all PRUPE_ppa001552mg retrocopies