Parental gene: | Sb04g001140 |
| Aliases: | None |
| Description: | None |
| Organism: | Sorghum (Sorghum bicolor) |
| Coordinates: | 4:981278..985460(-) |
>Sb04g001140
ATGGATCGGGTTCGCGGATCCGCGTTCCTGCTCGGCGTCCTGCTCGCAGGATCCCTGTTCGCATTTTCAGTTGCAAAGGA
GGAGACCAAGAAGCTCGGGACTGTGATCGGTATTGATCTCGGTACCACCTACTCCTGTGTTGGTGTGTACAAGAATGGTC
ATGTCGAGATCATCGCCAATGACCAGGGTAACCGTATCACACCCTCATGGGTTGCCTTCACTGATAGCGAGAGGCTCATC
GGTGAGGCTGCCAAGAACCAGGCAGCCGTGAACCCTGAGAGGACCATCTTTGACGTCAAGCGTCTCATTGGAAGAAAGTT
TGAGGACAAGGAAGTCCAGAGGGACATGAAACTTGTTCCCTACAAGATAATTAACAAGGATGGCAAGCCGTACATTCAGG
TCAAGATCAAGGACGGGGAGAATAAGGTCTTCAGCCCTGAGGAGATCAGTGCCATGATTCTTGGCAAGATGAAGGATACC
GCTGAGGCGTACCTTGGCAAGAAGATCAACGATGCTGTCGTCACTGTCCCTGCGTACTTCAATGATGCGCAGAGGCAGGC
AACCAAGGATGCTGGTGTCATTGCCGGCCTCAATGTTGCTAGGATCATCAATGAGCCAACTGCTGCTGCTATTGCCTACG
GTTTGGACAAGAAGGGTGGGGAGAAGAACATCCTTGTCTTTGACCTTGGTGGTGGTACTTTTGATGTCAGTATCTTGACC
ATTGACAACGGTGTCTTTGAGGTGCTGGCCACCAACGGTGACACCCATCTTGGAGGTGAGGACTTTGACCAGAGGATCAT
GGAGTACTTCATCAAGTTGATCAAGAAGAAGTACAGCAAGGACATCAGCAAGGACAACCGTGCTCTTGGAAAGCTGAGGA
GGGAAGCTGAGCGTGCCAAGAGGGCTCTCAGCAACCAGCACCAGGTCCGTGTTGAGATCGAGTCCCTCTTTGATGGGACC
GATTTCTCGGAGCCGCTGACCCGTGCCAGGTTTGAGGAGCTGAACAACGACCTGTTCCGCAAGACCATGGGCCCTGTCAA
GAAGGCCATGGAGGATGCTGGCCTTCAGAAGAGCCAGATCCATGAGATTGTCCTGGTTGGTGGAAGCACCAGGATTCCCA
AGGTCCAGCAGCTCCTGAGGGACTACTTTGATGGCAAGGAGCCCAACAAGGGTGTCAACCCTGATGAGGCTGTTGCCTTT
GGTGCCGCAGTGCAGGGAAGCATCTTGAGCGGCGAGGGTGGTGATGAGACCAAAGATATCCTCCTCCTTGATGTGGCACC
CCTCACCTTGGGTATTGAGACCGTCGGTGGAGTCATGACCAAGTTGATCCCGAGGAACACAGTCATCCCAACCAAGAAGT
CGCAGGTGTTCACCACCTACCAGGACCAGCAGACCACTGTCTCCATCCAGGTCTTCGAGGGTGAGCGCAGCATGACCAAG
GACTGCCGTCTTCTCGGCAAGTTCGACCTCTCTGGCATTCCACCAGCTCCAAGGGGCACTCCCCAGATCGAGGTGACCTT
CGAGGTGGACGCCAACGGTATCCTGAACGTGAAGGCGGAGGACAAGGGCACCGGCAAGTCAGAGAAGATCACCATCACCA
ACGAGAAGGGCCGTCTGAGCCAGGAGGAGATCGACCGCATGGTGAAGGAGGCGGAGGAGTTCGCTGAGGAGGACAAGAAG
GTGAAGGAGCGGATCGACGCCCGGAACCAGCTGGAGACGTACGTGTACAACATGAAGAACACGGTGGGCGACAAGGACAA
GCTCGCCGACAAGCTGGAGGCCGAGGAGAAGGAGAAGGTGGAGGAGGCCCTCAAGGAGGCGCTGGAGTGGCTGGACGACA
ACCAGTCGGCCGAGAAGGACGAGTACGTGGAGAAGCTCAAGGAGGTGGAGGCCGTCTGCAACCCCATCGTCTCGGCCGTG
TACCAGCGGTCCGGCGGCGCCCCCGGCGGTGGTGATGACTCGGAGGGTGGCGTCGACGACGACCACGACGAGCTGTA
ATGGATCGGGTTCGCGGATCCGCGTTCCTGCTCGGCGTCCTGCTCGCAGGATCCCTGTTCGCATTTTCAGTTGCAAAGGA
GGAGACCAAGAAGCTCGGGACTGTGATCGGTATTGATCTCGGTACCACCTACTCCTGTGTTGGTGTGTACAAGAATGGTC
ATGTCGAGATCATCGCCAATGACCAGGGTAACCGTATCACACCCTCATGGGTTGCCTTCACTGATAGCGAGAGGCTCATC
GGTGAGGCTGCCAAGAACCAGGCAGCCGTGAACCCTGAGAGGACCATCTTTGACGTCAAGCGTCTCATTGGAAGAAAGTT
TGAGGACAAGGAAGTCCAGAGGGACATGAAACTTGTTCCCTACAAGATAATTAACAAGGATGGCAAGCCGTACATTCAGG
TCAAGATCAAGGACGGGGAGAATAAGGTCTTCAGCCCTGAGGAGATCAGTGCCATGATTCTTGGCAAGATGAAGGATACC
GCTGAGGCGTACCTTGGCAAGAAGATCAACGATGCTGTCGTCACTGTCCCTGCGTACTTCAATGATGCGCAGAGGCAGGC
AACCAAGGATGCTGGTGTCATTGCCGGCCTCAATGTTGCTAGGATCATCAATGAGCCAACTGCTGCTGCTATTGCCTACG
GTTTGGACAAGAAGGGTGGGGAGAAGAACATCCTTGTCTTTGACCTTGGTGGTGGTACTTTTGATGTCAGTATCTTGACC
ATTGACAACGGTGTCTTTGAGGTGCTGGCCACCAACGGTGACACCCATCTTGGAGGTGAGGACTTTGACCAGAGGATCAT
GGAGTACTTCATCAAGTTGATCAAGAAGAAGTACAGCAAGGACATCAGCAAGGACAACCGTGCTCTTGGAAAGCTGAGGA
GGGAAGCTGAGCGTGCCAAGAGGGCTCTCAGCAACCAGCACCAGGTCCGTGTTGAGATCGAGTCCCTCTTTGATGGGACC
GATTTCTCGGAGCCGCTGACCCGTGCCAGGTTTGAGGAGCTGAACAACGACCTGTTCCGCAAGACCATGGGCCCTGTCAA
GAAGGCCATGGAGGATGCTGGCCTTCAGAAGAGCCAGATCCATGAGATTGTCCTGGTTGGTGGAAGCACCAGGATTCCCA
AGGTCCAGCAGCTCCTGAGGGACTACTTTGATGGCAAGGAGCCCAACAAGGGTGTCAACCCTGATGAGGCTGTTGCCTTT
GGTGCCGCAGTGCAGGGAAGCATCTTGAGCGGCGAGGGTGGTGATGAGACCAAAGATATCCTCCTCCTTGATGTGGCACC
CCTCACCTTGGGTATTGAGACCGTCGGTGGAGTCATGACCAAGTTGATCCCGAGGAACACAGTCATCCCAACCAAGAAGT
CGCAGGTGTTCACCACCTACCAGGACCAGCAGACCACTGTCTCCATCCAGGTCTTCGAGGGTGAGCGCAGCATGACCAAG
GACTGCCGTCTTCTCGGCAAGTTCGACCTCTCTGGCATTCCACCAGCTCCAAGGGGCACTCCCCAGATCGAGGTGACCTT
CGAGGTGGACGCCAACGGTATCCTGAACGTGAAGGCGGAGGACAAGGGCACCGGCAAGTCAGAGAAGATCACCATCACCA
ACGAGAAGGGCCGTCTGAGCCAGGAGGAGATCGACCGCATGGTGAAGGAGGCGGAGGAGTTCGCTGAGGAGGACAAGAAG
GTGAAGGAGCGGATCGACGCCCGGAACCAGCTGGAGACGTACGTGTACAACATGAAGAACACGGTGGGCGACAAGGACAA
GCTCGCCGACAAGCTGGAGGCCGAGGAGAAGGAGAAGGTGGAGGAGGCCCTCAAGGAGGCGCTGGAGTGGCTGGACGACA
ACCAGTCGGCCGAGAAGGACGAGTACGTGGAGAAGCTCAAGGAGGTGGAGGCCGTCTGCAACCCCATCGTCTCGGCCGTG
TACCAGCGGTCCGGCGGCGCCCCCGGCGGTGGTGATGACTCGGAGGGTGGCGTCGACGACGACCACGACGAGCTGTA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI3G01477 | ortholog_one2one | 1 retrogene | |
| Aegilops tauschii | F775_27431 | ortholog_one2one | 1 retrogene | |
| Oryza longistaminata | KN538684.1_FG046 | ortholog_one2one | 1 retrogene | |
| Hordeum vulgare | MLOC_55999 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA01G37420 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI02G01160 | ortholog_one2one | 1 retrogene | |
| Triticum aestivum | Traes_6DS_A593093E1 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sbic_39 | 76.34 | 95.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Sb04g001140 retrocopies