Parental gene: | TCM_011909 |
| Aliases: | None |
| Description: | Arogenate dehydratase/prephenate dehydratase 1 isoform 3 |
| Organism: | Cacao (Theobroma cacao) |
| Coordinates: | 2:42327976..42333237(+) |
>TCM_011909
ATGGAGCACGGTGAAGAGTTGACGAATTCCTTTGCCAACAAAGACAAGAAGAGCGTGTCATCCGGTCCGGCTTTCCATTC
CCAACAACATTTGCAGAGTAATGAAAGTCACAGGTCAGTAAGCTCCTCCGTTCAAGTTGGCAAAGCATCTGCTACTCATA
ACCAAGGAAGGAAATTCCACAAGGATTTGACTTCTCTCCCAAAGCCATTAACTGTTGCTGATTTATCAGCCACTCCTGAT
GATTCTTCAAAGGTGCGGATATCATTTAAGGGGACACTAGGTTCTTACAATGAGGATGCTGCACTCAAAGCCTACCCTAA
ATGTAAAACAGTACCCTGTGATGAGTTTGAAGATGCATTTAAGGCAGTTGAATTATGGCTAGCTGAAAAGGCAGTTCTTC
CAATTGAGAATTCTTCTGGCGGTAGCATCCATCGCAACTATGATTTACTCCTTCGTCATAGGCTTCATATTGTTGGTGAG
GTGCAGCTGCCTGTCAATTTCTGTCTACTAGCTCTGCCAGGGGTCAGAATTGAGCAGTTGAAACGAGTGCTAAGTCATCC
CCAGGCACTTGCCCTGAGTGACATTTTCCTGAGTAAGTTGGGTGTAGCCAGGGAAAATGTTGATGATACAGCTAGTGCTG
CTCAGTACGTAGCCTCAAATGGCCTGAGGGATGCTGCTGTTGTTGCAAGTATTAGAGCTGCACAAGTCTATGGACTTAAT
GTACTTGCTGAGAAAATTCAGGATGACCCTGACAATATCACTCGGTTTCTGGTACTTGCTAGGGATCCAATAATTTCAAG
GACTGATAAGCCCTTCAAGACAAGTATTGTATTTACTTTGGAAGAAGGGCCTGGGATATTGTTTAAAGCATTGGCAGTGT
TTGCACTGAGAGACATAAATTTGACAAAGATTGAAAGTCGGCCCCAGAGAAAACGGCCATTAAGAGTAGTTGATGACTCC
AACACTGGGGCGGCCAAGTACTTTGATTATCTTTTCTATATTGATTTTGAAGCTTCTATGGCTGAGCCTCGTGCACAAAA
TGCTTTGGGGCATTTGCAGGAATTTGCAACATTTCTTAGAGTACTTGGTTGCTATCCCATGGACACGACTTTGTAG
ATGGAGCACGGTGAAGAGTTGACGAATTCCTTTGCCAACAAAGACAAGAAGAGCGTGTCATCCGGTCCGGCTTTCCATTC
CCAACAACATTTGCAGAGTAATGAAAGTCACAGGTCAGTAAGCTCCTCCGTTCAAGTTGGCAAAGCATCTGCTACTCATA
ACCAAGGAAGGAAATTCCACAAGGATTTGACTTCTCTCCCAAAGCCATTAACTGTTGCTGATTTATCAGCCACTCCTGAT
GATTCTTCAAAGGTGCGGATATCATTTAAGGGGACACTAGGTTCTTACAATGAGGATGCTGCACTCAAAGCCTACCCTAA
ATGTAAAACAGTACCCTGTGATGAGTTTGAAGATGCATTTAAGGCAGTTGAATTATGGCTAGCTGAAAAGGCAGTTCTTC
CAATTGAGAATTCTTCTGGCGGTAGCATCCATCGCAACTATGATTTACTCCTTCGTCATAGGCTTCATATTGTTGGTGAG
GTGCAGCTGCCTGTCAATTTCTGTCTACTAGCTCTGCCAGGGGTCAGAATTGAGCAGTTGAAACGAGTGCTAAGTCATCC
CCAGGCACTTGCCCTGAGTGACATTTTCCTGAGTAAGTTGGGTGTAGCCAGGGAAAATGTTGATGATACAGCTAGTGCTG
CTCAGTACGTAGCCTCAAATGGCCTGAGGGATGCTGCTGTTGTTGCAAGTATTAGAGCTGCACAAGTCTATGGACTTAAT
GTACTTGCTGAGAAAATTCAGGATGACCCTGACAATATCACTCGGTTTCTGGTACTTGCTAGGGATCCAATAATTTCAAG
GACTGATAAGCCCTTCAAGACAAGTATTGTATTTACTTTGGAAGAAGGGCCTGGGATATTGTTTAAAGCATTGGCAGTGT
TTGCACTGAGAGACATAAATTTGACAAAGATTGAAAGTCGGCCCCAGAGAAAACGGCCATTAAGAGTAGTTGATGACTCC
AACACTGGGGCGGCCAAGTACTTTGATTATCTTTTCTATATTGATTTTGAAGCTTCTATGGCTGAGCCTCGTGCACAAAA
TGCTTTGGGGCATTTGCAGGAATTTGCAACATTTCTTAGAGTACTTGGTTGCTATCCCATGGACACGACTTTGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Vitis vinifera | VIT_12s0059g00750 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tcac_23 | 66.56 | 81.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all TCM_011909 retrocopies