>retro_dmel_77
ATGGCATCTGGAATTAATTTGAGCCGCGAGTGTCAGCACGTGTTCGAGCAGATCCGGAAGCTGAAGCAACATCGCTACGC
GGTCTTCGTCATCCAGGACGAGCGGGAGATTAAGGTGGAGGTGCTTGGAGTAAGGGAGGCGAACTACGACGACTTCCTGG
CGGATCTGCAACGTGCCGGATCCAATCAGTGCCGATTCGCTGTCTACGACTATGAGTATCAGCACCAGTGCCAGGGCACC
TTGTCCACCTGCCTGAAGGAGAAGCTAATCCTGATGCTCTGGTGTCCCACTCTGGCCAGGATCAAGGACAAGATGCTCTA
CTCCAGCACGTTTGCGGTGCTCAAGCGAGAGTTTCCCGGCGTCCAGAAGTGCATTCAGGCCACCGAACCGGAGGAGGCGT
GCCGCAATGCTGTCGAGGAGCAGCTGCGCTCCTTGGACAGGGAGTAG
ORF - retro_dmel_77 Open Reading Frame is conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
52.7 % |
Parental protein coverage: |
100. % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
0 |
Retrocopy - Parental Gene Alignment:
Parental | MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCGPGECRYGLFD |
| MASG...S..C....E.I.K.K.HRY..F.I.DE..I.VE....R.A.YD.FL.D.Q..G...CR....D |
Retrocopy | MASGINLSRECQHVFEQIRKLKQHRYAVFVIQDEREIKVEVLGVREANYDDFLADLQRAGSNQCRFAVYD |
|
Parental | FEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASREAVEE |
| .EY.HQCQGT.....K.KL.LM.WCP..A..K.KMLYSS.F..LK....GVQK.IQAT...EA.R.AVEE |
Retrocopy | YEYQHQCQGTLSTCLKEKLILMLWCPTLARIKDKMLYSSTFAVLKREFPGVQKCIQATEPEEACRNAVEE |
|
Parental | KLRATDRQ |
| .LR..DR. |
Retrocopy | QLRSLDRE |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Drosophila melanogaster was not studied using RNA-Seq expression data.
Drosophila melanogaster was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_dmel_77 retrocopy.
Drosophila melanogaster was not studied using FANTOM5 data.
retro_dmel_77 was not experimentally validated.
Retrocopy orthology:
Drosophila melanogaster does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
1 parental gene, and
1 retrocopy.