RetrogeneDB ID: | retro_etel_1867 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_309342:163919..164270(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KDELR2 | ||
Ensembl ID: | ENSETEG00000016544 | ||
Aliases: | None | ||
Description: | KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 [Source:HGNC Symbol;Acc:6305] |
Percent Identity: | 97.44 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MNIFRLTGDLSHLAAIVILLLKIWKTRSCSGISEKSQLLFALVFTTRYLDLFTSFISLYNTSMKLIYIAC |
MNIFRLTGDLSHLAAIVILLLKIWKTRSC.GIS.KSQLLFALVFTTRYLDLFT.FISLYNTSMKLIYIAC | |
Retrocopy | MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTAFISLYNTSMKLIYIAC |
Parental | SYATVYLIYMKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLE |
SYATVYLIYMKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLE | |
Retrocopy | SYATVYLIYMKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000015746 | 2 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000000125 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000009897 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000016544 | 1 retrocopy |
retro_etel_1867 ,
|
Monodelphis domestica | ENSMODG00000007832 | 1 retrocopy |