RetrogeneDB ID: | retro_etel_27 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_9050:239375..239732(+) | ||
Located in intron of: | ENSETEG00000000234 | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000000235 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000018904 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.14 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MATPSLRGRLARLGNPRKPVLKPNKPLILANAIGERRREKGEATCVTEMSMMMACWKLNEFHDEPCRKEI |
MA.PSLRG.L...GNP.KPVLKPNKPL.LAN.I.E.RREKGEATC.TEMSMMMACWKLNEFHDEPCRKEI | |
Retrocopy | MAMPSLRGLLVQVGNPQKPVLKPNKPLVLANFIREQRREKGEATCITEMSMMMACWKLNEFHDEPCRKEI |
Parental | QDFFDCASRAEAARKMKSIQDTLGESGNLSPKKLNKLLQKFPNKPHVS |
QDFFDCASRAEAA.KMKSIQDT.GESGNLSPKKLN.LLQKFPNKPHVS | |
Retrocopy | QDFFDCASRAEAAGKMKSIQDTRGESGNLSPKKLNRLLQKFPNKPHVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Erinaceus europaeus | ENSEEUG00000015523 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000018904 | 1 retrocopy |
retro_etel_27 ,
|
Monodelphis domestica | ENSMODG00000000361 | 1 retrocopy |