RetrogeneDB ID: | retro_etel_531 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_8833:117519..117819(-) | ||
Located in intron of: | ENSETEG00000012167 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000001939 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81. % |
Parental protein coverage: | 61.73 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SPWMVARFVWITRASLPGGPEGVPLVPMGVVAATPEVVGTRAMGAAGMTVDLEDTDMDTEDPETIVAEAR |
SPWMV.RF.W...ASLP.GPEGVPLV.MGVVAATPEVVG.RAMG.A...VDLEDTDMD.E.PET.VAEAR | |
Retrocopy | SPWMVTRFMWNMQASLPRGPEGVPLVLMGVVAATPEVVGIRAMGGACRIVDLEDTDMDAEGPETTVAEAR |
Parental | VVMTAILEEIIEIITTTEMRHAHNVDTQGI |
VVMT..LEEIIEII.TTEMRHA.NVDTQGI | |
Retrocopy | VVMTTTLEEIIEIIMTTEMRHAYNVDTQGI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000002320 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000001939 | 6 retrocopies |
retro_etel_1057, retro_etel_1060, retro_etel_1209, retro_etel_1476, retro_etel_169, retro_etel_531 ,
|
Microcebus murinus | ENSMICG00000014371 | 5 retrocopies | |
Macaca mulatta | ENSMMUG00000004439 | 1 retrocopy | |
Sorex araneus | ENSSARG00000003340 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000003499 | 10 retrocopies |