RetrogeneDB ID: | retro_etel_834 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_172429:3338..3620(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000011522 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 54.26 % |
Parental protein coverage: | 80.17 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SANQYEKAFSSKYLQNWSPSKSTK-ESISSHEGYTQIIADDRGHLLPSVPRSKASPWGSFMGTWQMPLKI |
S.N...K...S.Y....S.....K..S.SSHEG.TQIIA..R..LLPSVPRSK...WGSFM.T..MPL.. | |
Retrocopy | SLNRSTKNSGSNYIKKLSHANICKTKSDSSHEGCTQIIAIQRLPLLPSVPRSKKNYWGSFMDTQEMPLRT |
Parental | PPARVTLTSRTMASAASLTKWIQK |
..ARV.L....M.SAA.LTK.IQK | |
Retrocopy | LQARVILIFLAMVSAAFLTKLIQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000004753 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000011522 | 1 retrocopy |
retro_etel_834 ,
|
Tupaia belangeri | ENSTBEG00000015510 | 1 retrocopy |