RetrogeneDB ID: | retro_lafr_305 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_12:9052438..9052858(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23 | ||
Ensembl ID: | ENSLAFG00000028450 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKP |
MSK.GRGGSSGAKF.ISLGL.VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGD.VMATVKK.KP | |
Retrocopy | MSK*GRGGSSGAKFLISLGLLVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDVVMATVKKLKP |
Parental | ELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSIA |
E.RKKVHPAVVI.Q.KSY.RKDGVFLY.EDNAGVIVNNKG.MKGSAITGP.AKE.ADLWPRIASNAGSI. | |
Retrocopy | EFRKKVHPAVVIQQ*KSYWRKDGVFLYSEDNAGVIVNNKGKMKGSAITGPAAKERADLWPRIASNAGSIS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |