RetrogeneDB ID: | retro_meug_1005 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold256524:1209..1481(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000005462 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.52 % |
Parental protein coverage: | 67.16 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | AQGSELSSEACRDLGFSSNLLCSSCDLLGQFSLTPLDPDCRGCCQEEA--QFETRKLYAGAILEVCG-UK |
AQGSELSSE..R.LGFSSNL.CS.CD.LGQFSLT.LDP.CR.CC.EE.....E...LYAG.I.EVCG..K | |
Retrocopy | AQGSELSSET*RELGFSSNLRCSPCD-LGQFSLTHLDPNCRKCCLEEPV*YLE*QHLYAGVISEVCG<MK |
Parental | LGXXXXXXXFVKSDKPKLFRGLQ |
LG.......F.KS.KPKLFR.L. | |
Retrocopy | LGRSPQVPAFLKSEKPKLFRELK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000004701 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000005462 | 4 retrocopies | |
Monodelphis domestica | ENSMODG00000008134 | 2 retrocopies | |
Ochotona princeps | ENSOPRG00000003411 | 2 retrocopies | |
Vicugna pacos | ENSVPAG00000011775 | 1 retrocopy |