RetrogeneDB ID: | retro_meug_1062 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold27410:6225..6572(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | COMMD7 | ||
Ensembl ID: | ENSMEUG00000010627 | ||
Aliases: | None | ||
Description: | COMM domain containing 7 [Source:HGNC Symbol;Acc:16223] |
Percent Identity: | 80.34 % |
Parental protein coverage: | 67.44 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | YFLVQPKEVETFLAKLSDFAATNQISLGPLKNIVKSLLLVPNGALKKNMTAEQVRADFITLGLSEEKATY |
..LVQPKE.ETFL.K.SDFAATN.ISLGPL.NI..SLL.VPNGALKKNM.A.QVRADFITLGLSEEK..Y | |
Retrocopy | FHLVQPKEIETFLGKMSDFAATNKISLGPLSNIMTSLLQVPNGALKKNMPAKQVRADFITLGLSEEKVAY |
Parental | FSEKWKQKSPTLARWAIGQTLMINQLIDME-WKFGVTSGSSELQKVG |
FSE.WKQKSP.LA.WAIGQTLMIN..IDME..KFGVTS..SELQKVG | |
Retrocopy | FSELWKQKSPILA*WAIGQTLMINRIIDME<KKFGVTSSGSELQKVG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000008561 | 2 retrocopies | |
Loxodonta africana | ENSLAFG00000008789 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000010627 | 1 retrocopy |
retro_meug_1062 ,
|
Monodelphis domestica | ENSMODG00000019450 | 3 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000006762 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000006640 | 1 retrocopy |