RetrogeneDB ID: | retro_meug_1084 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold282519:2335..2719(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KDELR1 | ||
Ensembl ID: | ENSMEUG00000009868 | ||
Aliases: | None | ||
Description: | KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 [Source:HGNC Symbol;Acc:6304] |
Percent Identity: | 79.84 % |
Parental protein coverage: | 68.09 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | ISGKSQ-LFPEVFITHYLDLLTNSISLDTSVKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVVPT |
ISGKSQ.LF..VF...YLDL.TN.ISL..S.KVVYIACSFTT.W.IYSKFKA..DGNHDTF.VEFLVVPT | |
Retrocopy | ISGKSQVLFVMVFTVRYLDLTTNYISLYKSMKVVYIACSFTTIWRIYSKFKAHSDGNHDTFQVEFLVVPT |
Parental | AILAFLVNHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTL |
AIL..L.NHDFTP.EI..TF.IYLESVAILPQLFMVSKT.E.ETI.SHYLFALGVYRTL | |
Retrocopy | AILGLLINHDFTPVEIR-TFFIYLESVAILPQLFMVSKTEEEETIISHYLFALGVYRTL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Macropus eugenii | ENSMEUG00000009868 | 1 retrocopy |
retro_meug_1084 ,
|
Rattus norvegicus | ENSRNOG00000021082 | 1 retrocopy |