>retro_meug_1436
ATGGCACTCCCCGGGCTGCACCGTGCCAAGCTCGTGCTTCTCGCAGCCTCCTTCCTGGCCGGGGCCATGGTGGCTGCCGC
AGTCGTCCGGACTCAGGGCTCCTTTAAAGGCCAGTGCCCCATCTATGGCACTGCCCTGCGGAATGGCTCCTCCCTCGGCC
TTGTCCAGCTCCTCTGCCCCATCCCTCTGCTACTTTGTGGCAGGGGTCTCAGGCTTTCTGGCCCTTTACGGGCTCTTGTT
GTTGTTCTACTGGATATACAGCAGCTGCCTAGAAGATTCTCAGAGAAGCCCCCTTGGCCTTCGCATCTCTGTGGGCTTCT
CGGCCATGGCCATCTTTCTGGTCCTAGTATCATCTTGCATCCTACGATGG
ORF - retro_meug_1436 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
94.35 % |
Parental protein coverage: |
56.16 % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
1 |
Retrocopy - Parental Gene Alignment:
Parental | MALPGLHRAELVLLAAAFLAGAVVAAAVVRTQGSFKGQCPIYGTALWNGSSL-ALSSSSAPSLCYFVAGV |
| MALPGLHRA.LVLLAA.FLAGA.VAAAVVRTQGSFKGQCPIYGTAL.NGSSL.ALSSSSAPSLCYFVAGV |
Retrocopy | MALPGLHRAKLVLLAASFLAGAMVAAAVVRTQGSFKGQCPIYGTALRNGSSL>ALSSSSAPSLCYFVAGV |
|
Parental | SGFLALYGLLLLFYWIYSSCLEDSQRSPLGLRISVGLSAMAIFLVLVSSCILRF |
| SGFLALYGLLLLFYWIYSSCLEDSQRSPLGLRISVG.SAMAIFLVLVSSCILR. |
Retrocopy | SGFLALYGLLLLFYWIYSSCLEDSQRSPLGLRISVGFSAMAIFLVLVSSCILRW |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Macropus eugenii was not studied using RNA-Seq expression data.
Macropus eugenii was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_meug_1436 retrocopy.
Macropus eugenii was not studied using FANTOM5 data.
retro_meug_1436 was not experimentally validated.
Retrocopy orthology:
Macropus eugenii does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
1 parental gene, and
1 retrocopy.